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Nucleic Acids Research, 2004, Vol. 32, Database issue D421-D422
© 2004 Oxford University Press

AppaDB: an AcedB database for the nematode satellite organism Pristionchus pacificus

Jagan Srinivasan, Georg W. Otto1, Ulrich Kahlow2, Robert Geisler1 and Ralf J. Sommer*

Abteilung für Evolutionsbiologie, 1 Abteilung für Genetik and 2 Abteilung für Protein Evolution, Max-Planck Institut für Entwicklungsbiologie, Spemannstrasse 35–37, 72076 Tübingen, Germany

*To whom correspondence should be addressed. Tel: +49 7071 601 371; Fax: +49 7071 601 498; Email: ralf.sommer{at}tuebingen.mpg.de

Pristionchus pacificus is a free-living nematode of the Diplogastridae family and was recently developed as a satellite system in evolutionary developmental biology. AppaDB, a P.pacificus database, was created (http://appadb.eb.tuebingen. mpg.de) to integrate the genomic data of P.pacificus, comprising the physical map, genetic linkage map, EST and BAC end sequence and hybridization data. This developing database serves as a repository to search and find any information regarding physical contigs or genetic markers required for mapping of mutants. Additionally, it provides a platform for the Caenorhabditis elegans community to compare nematode genetic data in an evolutionary perspective.


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