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Nucleic Acids Research 2005 33(Database Issue):D269-D274; doi:10.1093/nar/gki111
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Nucleic Acids Research, 2005, Vol. 33, Database issue D269-D274
© 2005, the authors
Nucleic Acids Research, Vol. 33, Database issue © Oxford University Press 2005; all rights reserved

STING Report: convenient web-based application for graphic and tabular presentations of protein sequence, structure and function descriptors from the STING database

Goran Neshich*, Adauto L. Mancini, Michel E. B. Yamagishi, Paula R. Kuser, Renato Fileto, Ivan P. Pinto, Juliana F. Palandrani, João N. Krauchenco, Christian Baudet, Arnaldo J. Montagner and Roberto H. Higa

Núcleo de Bioinformática Estrutural, Embrapa/Informática Agropecuária, 13083-886 Campinas, Brazil

* To whom correspondence should be addressed. Tel: +55 19 3789 5774; Fax: +55 19 3289 9594; Email: neshich{at}cnptia.embrapa.br

Received August 4, 2004; Revised and Accepted October 18, 2004

The Sting Report is a versatile web-based application for extraction and presentation of detailed information about any individual amino acid of a protein structure stored in the STING Database. The extracted information is presented as a series of GIF images and tables, containing the values of up to 125 sequence/structure/function descriptors/parameters. The GIF images are generated by the Gold STING modules. The HTML page resulting from the STING Report query can be printed and, most importantly, it can be composed and visualized on a computer platform with an elementary configuration. Using the STING Report, a user can generate a collection of customized reports for amino acids of specific interest. Such a collection comes as an ideal match for a demand for the rapid and detailed consultation and documentation of data about structure/function. The inclusion of information generated with STING Report in a research report or even a textbook, allows for the increased density of its contents. STING Report is freely accessible within the Gold STING Suite at http://www.cbi.cnptia.embrapa.br, http://www.es.embnet.org/SMS/, http://gibk26.bse.kyutech.ac.jp/SMS/ and http://trantor.bioc.columbia.edu/SMS (option: STING Report).

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G. Neshich, L. C. Borro, R. H. Higa, P. R. Kuser, M. E. B. Yamagishi, E. H. Franco, J. N. Krauchenco, R. Fileto, A. A. Ribeiro, G. B. P. Bezerra, et al.
The Diamond STING server
Nucleic Acids Res., July 1, 2005; 33(suppl_2): W29 - W35.
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