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Nucleic Acids Research 2006 34(Database Issue):D556-D561; doi:10.1093/nar/gkj133
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Nucleic Acids Research, 2006, Vol. 34, Database issue D556-D561
© The Author 2006. Published by Oxford University Press. All rights reserved
The online version of this article has been published under an open access model. Users are entitled to use, reproduce, disseminate, or display the open access version of this article for non-commercial purposes provided that: the original authorship is properly and fully attributed; the Journal and Oxford University Press are attributed as the original place of publication with the correct citation details given; if an article is subsequently reproduced or disseminated not in its entirety but only in part or as a derivative work this must be clearly indicated. For commercial re-use, please contact journals.permissions{at}oxfordjournals.org


Article

Ensembl 2006

E. Birney1,*, D. Andrews1, M. Caccamo, Y. Chen1, L. Clarke1, G. Coates1, T. Cox1, F. Cunningham1, V. Curwen1, T. Cutts1, T. Down1, R. Durbin, X. M. Fernandez-Suarez, P. Flicek, S. Gräf, M. Hammond, J. Herrero1, K. Howe1, V. Iyer1, K. Jekosch, A. Kähäri, A. Kasprzyk, D. Keefe1, F. Kokocinski1, E. Kulesha, D. London, I. Longden, C. Melsopp1, P. Meidl1, B. Overduin1, A. Parker, G. Proctor1, A. Prlic1, M. Rae, D. Rios1, S. Redmond, M. Schuster1, I. Sealy1, S. Searle, J. Severin, G. Slater, D. Smedley1, J. Smith, A. Stabenau1, J. Stalker1, S. Trevanion, A. Ureta-Vidal1, J. Vogel1, S. White, C. Woodwark1 and T. J. P. Hubbard

European Bioinformatics Institute (EMBL-EBI) Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK 1Wellcome Trust Sanger Institute Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK

*To whom correspondence should be addressed. Tel: +44 1223 494420; Fax: +44 1223 494470; Email: birney{at}ebi.ac.uk

Received September 14, 2005. Revised October 25, 2005. Accepted October 25, 2005.

The Ensembl (http://www.ensembl.org/) project provides a comprehensive and integrated source of annotation of large genome sequences. Over the last year the number of genomes available from the Ensembl site has increased from 4 to 19, with the addition of the mammalian genomes of Rhesus macaque and Opossum, the chordate genome of Ciona intestinalis and the import and integration of the yeast genome. The year has also seen extensive improvements to both data analysis and presentation, with the introduction of a redesigned website, the addition of RNA gene and regulatory annotation and substantial improvements to the integration of human genome variation data.


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Bioinformatics, November 15, 2006; 22(22): 2835 - 2837.
[Abstract] [Full Text] [PDF]


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W. H. Press and H. Robins
Isochores Exhibit Evidence of Genes Interacting With the Large-Scale Genomic Environment
Genetics, October 1, 2006; 174(2): 1029 - 1040.
[Abstract] [Full Text] [PDF]



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