Nucleic Acids Research Advance Access originally published online on December 14, 2006
Nucleic Acids Research 2007 35(Database issue):D304-D307; doi:10.1093/nar/gkl1007
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Nucleic Acids Research, 2007, Vol. 35, Database issue D304-D307
© 2006 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
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Protein Folding Database (PFD 2.0): an online environment for the International Foldeomics Consortium
1 The Department of Biochemistry and Molecular Biology, School of Biomedical Sciences, Faculty of Medicine, Monash University Clayton, Victoria 3800, Australia 2 The ARC Centre of Excellence for Structural and Functional Microbial Genomics, Monash University Clayton, Victoria 3800, Australia
*To whom correspondence should be addressed. Tel: +61 9905 3781; Fax: +61 9905 9773; Email: ashley.buckle{at}med.monash.edu.au
Received September 15, 2006. Revised November 2, 2006. Accepted November 2, 2006.
The Protein Folding Database (PFD) is a publicly accessible repository of thermodynamic and kinetic protein folding data. Here we describe the first major revision of this work, featuring extensive restructuring that conforms to standards set out by the recently formed International Foldeomics Consortium. The database now adopts standards for data acquisition, analysis and reporting proposed by the consortium, which will facilitate the comparison of folding rates, energies and structure across diverse sets of proteins. Data can now be easily deposited using a rich set of deposition tools. Enhanced search tools allow sophisticated searching and graphical data analysis affords simple data analysis online. PFD can be accessed freely at http://www.foldeomics.org/pfd/.
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