Skip Navigation


Nucleic Acids Research Advance Access originally published online on November 7, 2006
Nucleic Acids Research 2007 35(Database issue):D422-D426; doi:10.1093/nar/gkl881
This Article
Right arrow Full Text Freely available
Right arrow Print PDF (2608K) Freely available
Right arrow Screen PDF (519K) Freely available
Right arrowOA All Versions of this Article:
35/suppl_1/D422    most recent
gkl881v1
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Citing Articles
Right arrowScopus Links
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Arshinoff, B. I.
Right arrow Articles by Welch, R. D.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Arshinoff, B. I.
Right arrow Articles by Welch, R. D.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, 2007, Vol. 35, Database issue D422-D426
© 2006 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

Articles

Xanthusbase: adapting wikipedia principles to a model organism database

Bradley I. Arshinoff, Garret Suen, Eric M. Just1, Sohel M. Merchant1, Warren A. Kibbe1, Rex L. Chisholm1 and Roy D. Welch*

Department of Biology, Syracuse University Syracuse, NY 13244, USA 1 Center for Genetic Medicine, Feinberg School of Medicine, Northwestern University Chicago, IL 60611, USA

*To whom correspondence should be addressed. Tel: +1 315 443 2159; Fax: +1 315 443 2012; Email: rowelch{at}syr.edu

Received August 15, 2006. Revised October 10, 2006. Accepted October 11, 2006.

xanthusBase (http://www.xanthusbase.org) is the official model organism database (MOD) for the social bacterium Myxococcus xanthus. In many respects, M.xanthus represents the pioneer model organism (MO) for studying the genetic, biochemical, and mechanistic basis of prokaryotic multicellularity, a topic that has garnered considerable attention due to the significance of biofilms in both basic and applied microbiology research. To facilitate its utility, the design of xanthusBase incorporates open-source software, leveraging the cumulative experience made available through the Generic Model Organism Database (GMOD) project, MediaWiki (http://www.mediawiki.org), and dictyBase (http://www.dictybase.org), to create a MOD that is both highly useful and easily navigable. In addition, we have incorporated a unique Wikipedia-style curation model which exploits the internet's inherent interactivity, thus enabling M.xanthus and other myxobacterial researchers to contribute directly toward the ongoing genome annotation.


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 MicrobiologyHome page
W. P. Black, Q. Xu, C. L. Cadieux, S.-J. Suh, W. Shi, and Z. Yang
Isolation and characterization of a suppressor mutation that restores Myxococcus xanthus exopolysaccharide production
Microbiology, November 1, 2009; 155(11): 3599 - 3610.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.