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Nucleic Acids Research Advance Access originally published online on October 11, 2007
Nucleic Acids Research 2008 36(Database issue):D954-D958; doi:10.1093/nar/gkm835
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Nucleic Acids Research, 2008, Vol. 36, Database issue D954-D958
© 2007 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

Articles

MetaCrop: a detailed database of crop plant metabolism

Eva Grafahrend-Belau, Stephan Weise, Dirk Koschützki, Uwe Scholz, Björn H. Junker and Falk Schreiber*

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstrasse 3, D-06466 Gatersleben, Germany

* To whom correspondence should be addressed. Tel: +49 39482 5753; Fax: +49 39482 5407; Email: schreibe{at}ipk-gatersleben.de

Received August 15, 2007. Revised September 21, 2007. Accepted September 21, 2007.

MetaCrop is a manually curated repository of high quality information concerning the metabolism of crop plants. This includes pathway diagrams, reactions, locations, transport processes, reaction kinetics, taxonomy and literature. MetaCrop provides detailed information on six major crop plants with high agronomical importance and initial information about several other plants. The web interface supports an easy exploration of the information from overview pathways to single reactions and therefore helps users to understand the metabolism of crop plants. It also allows model creation and automatic data export for detailed models of metabolic pathways therefore supporting systems biology approaches. The MetaCrop database is accessible at http://metacrop.ipk-gatersleben.de.


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