Nucleic Acids Research Advance Access originally published online on October 27, 2008
Nucleic Acids Research 2009 37(Database issue):D396-D403; doi:10.1093/nar/gkn803
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Nucleic Acids Research, 2009, Vol. 37, Database issue D396-D403
© 2008 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
This article appears in the following Nucleic Acids Research issue: Database issue [View the issue table of contents]
Articles |
The GOA database in 2009—an integrated Gene Ontology Annotation resource
Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
*To whom correspondence should be addressed. Tel: +44 1223 494444; Fax: +44 1223 494468; Email: goa{at}ebi.ac.uk
Received September 12, 2008. Revised October 9, 2008. Accepted October 10, 2008.
The Gene Ontology Annotation (GOA) project at the EBI (http://www.ebi.ac.uk/goa) provides high-quality electronic and manual associations (annotations) of Gene Ontology (GO) terms to UniProt Knowledgebase (UniProtKB) entries. Annotations created by the project are collated with annotations from external databases to provide an extensive, publicly available GO annotation resource. Currently covering over 160 000 taxa, with greater than 32 million annotations, GOA remains the largest and most comprehensive open-source contributor to the GO Consortium (GOC) project. Over the last five years, the group has augmented the number and coverage of their electronic pipelines and a number of new manual annotation projects and collaborations now further enhance this resource. A range of files facilitate the download of annotations for particular species, and GO term information and associated annotations can also be viewed and downloaded from the newly developed GOA QuickGO tool (http://www.ebi.ac.uk/QuickGO), which allows users to precisely tailor their annotation set.
CiteULike 
Connotea 
Del.icio.us What's this?
This article has been cited by other articles:
|
|
 |
|
  L. J. Su, P. K. Auluck, T. F. Outeiro, E. Yeger-Lotem, J. A. Kritzer, D. F. Tardiff, K. E. Strathearn, F. Liu, S. Cao, S. Hamamichi, et al. Compounds from an unbiased chemical screen reverse both ER-to-Golgi trafficking defects and mitochondrial dysfunction in Parkinson's disease models Dis. Model. Mech., March 1, 2010; 3(3-4): 194 - 208. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. Li, Y. Liu, D. Dong, and Z. Zhang Evolution of an X-Linked Primate-Specific Micro RNA Cluster Mol. Biol. Evol., March 1, 2010; 27(3): 671 - 683. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. Bauer, J. Gagneur, and P. N. Robinson GOing Bayesian: model-based gene set analysis of genome-scale data Nucleic Acids Res., February 19, 2010; (2010) gkq045v1. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Velankar, C. Best, B. Beuth, C. H. Boutselakis, N. Cobley, A. W. Sousa Da Silva, D. Dimitropoulos, A. Golovin, M. Hirshberg, M. John, et al. PDBe: Protein Data Bank in Europe Nucleic Acids Res., January 1, 2010; 38(suppl_1): D308 - D317. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y. Zhang, J. Lv, H. Liu, J. Zhu, J. Su, Q. Wu, Y. Qi, F. Wang, and X. Li HHMD: the human histone modification database Nucleic Acids Res., January 1, 2010; 38(suppl_1): D149 - D154. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P. S. Dehal, M. P. Joachimiak, M. N. Price, J. T. Bates, J. K. Baumohl, D. Chivian, G. D. Friedland, K. H. Huang, K. Keller, P. S. Novichkov, et al. MicrobesOnline: an integrated portal for comparative and functional genomics Nucleic Acids Res., January 1, 2010; 38(suppl_1): D396 - D400. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. Schlicker and M. Albrecht FunSimMat update: new features for exploring functional similarity Nucleic Acids Res., January 1, 2010; 38(suppl_1): D244 - D248. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
C. Yamasaki, K. Murakami, J.-i. Takeda, Y. Sato, A. Noda, R. Sakate, T. Habara, H. Nakaoka, F. Todokoro, A. Matsuya, et al. H-InvDB in 2009: extended database and data mining resources for human genes and transcripts Nucleic Acids Res., January 1, 2010; 38(suppl_1): D626 - D632. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. Samarghitean, C. Ortutay, and M. Vihinen Systematic Classification of Primary Immunodeficiencies Based on Clinical, Pathological, and Laboratory Parameters J. Immunol., December 1, 2009; 183(11): 7569 - 7575. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. Liu, J. R. Faeder, and C. J. Camacho Toward a quantitative theory of intrinsically disordered proteins and their function PNAS, November 24, 2009; 106(47): 19819 - 19823. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 D. Binns, E. Dimmer, R. Huntley, D. Barrell, C. O'Donovan, and R. Apweiler QuickGO: a web-based tool for Gene Ontology searching Bioinformatics, November 15, 2009; 25(22): 3045 - 3046. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. Soderlund Computational techniques for elucidating plant-pathogen interactions from large-scale experiments on fungi and oomycetes Brief Bioinform, November 1, 2009; 10(6): 654 - 663. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. L. Hufton, S. Mathia, H. Braun, U. Georgi, H. Lehrach, M. Vingron, A. J. Poustka, and G. Panopoulou Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention Genome Res., November 1, 2009; 19(11): 2036 - 2051. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 F. Golebiowski, I. Matic, M. H. Tatham, C. Cole, Y. Yin, A. Nakamura, J. Cox, G. J. Barton, M. Mann, and R. T. Hay System-Wide Changes to SUMO Modifications in Response to Heat Shock Sci. Signal., May 26, 2009; 2(72): ra24 - ra24. [Abstract] [Full Text] [PDF]
|
|