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Nucleic Acids Research Advance Access originally published online on November 25, 2008
Nucleic Acids Research 2009 37(Database issue):D690-D697; doi:10.1093/nar/gkn828
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Nucleic Acids Research, 2009, Vol. 37, Database issue D690-D697
© 2008 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

This article appears in the following Nucleic Acids Research issue: Database issue [View the issue table of contents]

Articles

Ensembl 2009

T. J. P. Hubbard1,*, B. L. Aken1, S. Ayling1, B. Ballester2, K. Beal2, E. Bragin1, S. Brent1, Y. Chen2, P. Clapham1, L. Clarke1, G. Coates1, S. Fairley1, S. Fitzgerald2, J. Fernandez-Banet1, L. Gordon2, S. Graf2, S. Haider2, M. Hammond2, R. Holland2, K. Howe1, A. Jenkinson2, N. Johnson2, A. Kahari2, D. Keefe2, S. Keenan2, R. Kinsella2, F. Kokocinski1, E. Kulesha2, D. Lawson2, I. Longden2, K. Megy2, P. Meidl2, B. Overduin2, A. Parker1, B. Pritchard1, D. Rios2, M. Schuster2, G. Slater2, D. Smedley2, W. Spooner2, G. Spudich2, S. Trevanion1, A. Vilella2, J. Vogel1, S. White1, S. Wilder2, A. Zadissa1, E. Birney2, F. Cunningham2, V. Curwen1, R. Durbin1, X. M. Fernandez-Suarez2, J. Herrero2, A. Kasprzyk2, G. Proctor2, J. Smith1, S. Searle1 and P. Flicek2

1Wellcome Trust Sanger Institute and 2European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK

*To whom correspondence should be addressed. Tel: +44 1223 496886; Fax: +44 1223 494919; Email: th{at}sanger.ac.uk

Received October 14, 2008. Accepted October 14, 2008.

The Ensembl project (http://www.ensembl.org) is a comprehensive genome information system featuring an integrated set of genome annotation, databases, and other information for chordate, selected model organism and disease vector genomes. As of release 51 (November 2008), Ensembl fully supports 45 species, and three additional species have preliminary support. New species in the past year include orangutan and six additional low coverage mammalian genomes. Major additions and improvements to Ensembl since our previous report include a major redesign of our website; generation of multiple genome alignments and ancestral sequences using the new Enredo-Pecan-Ortheus pipeline and development of our software infrastructure, particularly to support the Ensembl Genomes project (http://www.ensemblgenomes.org/).


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