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Nucleic Acids Research, 1978, Vol. 5, No. 9 3439-3455
© 1978


Articles

Antibodies to N6-({Delta}2-isopentenyl) adenosine and its nucleotide: interaction with purified tRNAs and with bases, nucleosides and nucleotides of the isopentenyladenosine family

Dave S. Milstone, Barbara S. Vold, Dohn G. Glitz+ and Nadene Shutt+

Biomedical Research Department, SRI International 333 Ravenswood Ave., Menlo Park, CA 94025, USA +Department of Biological Chemistry, UCLA School of Medicine, University of California Los Angeles, CA 90024, USA

Received May 22, 1978. The interaction of antibodies directed toward N6-({Delta}2-isopentenyl) adenosine, i6Ado or its nucleotide with related bases, nucleosides, nucleotides and purified tRNAs is described. The selectivity of the antibody preparation was tested in inhibition experiments utilizing a sensitive radioimmunoassay to quantitate the binding of [3H]i6 to the antibody. Purified tRNAs containing various modified nucleosides adjacent to the 3'-end of the anticodon were tested to provide information about the selectivity of the antibody preparation toward nucleotides in this position of the tRNA chain. Antibodies directed against the nucleotide hapten were used to purify tRNAs which contain i6 and to quantitate the amount of that nucleotide. The same order of selectivity was expressed whether the nucleotides were free or in a tRNA molecule. Interaction of the antibody with compounds from the i6 family demonstrated dominance of the hydrophobic isopentenyl group and the importance of positional differences of modifications.


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