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Nucleic Acids Research, 1981, Vol. 9, No. 14 3545-3554
© 1981


MOLECULAR BIOLOGY

Detection of high levels of polyadenylate-containing RNA in bacteria by the use of a single-step RNA isolation procedure

Yanamandra Gopalakrishna, Donna Langley and Nilima Sarkar

Department of Metabolic Regulation, Boston Biomedical Research Institute Boston, MA 02114, USA Department of Biological Chemistry, Harvard Medical School Boston, MA 02115, USA

Received April 20, 1981. A new one-step procedure for the isolation of bacterial RNA, involving lysis by proteinase K in the presence of sodium dodecyl sulfate, is described. Pulse-labeled RNA isolated by this procedure from Bacillus brevis, Bacillus subtilis, and Escherichia coli B has been found to contain a substantial fraction (15–40%) of polyadenylated RNA as determined by adsorption to oligo (dT)-cellulose. This contrasts with RNA isolated by procedures involving phenol extraction, a process which appears to lead to the selective loss of polyadenylated RNA. The presence of polyadenylated RNA in E. coli was confirmed by an independent method which involved hybridization with [3H]polyuridylic acid. Using the proteinase K method for RNA isolation, it was possible to demonstrate the in vitro synthesis of polyadenylated RNA by toluenetreated cells of B. brevis, B. subtilis, and E. coli.


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