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Nucleic Acids Research Advance Access published online on November 11, 2009
Nucleic Acids Research, doi:10.1093/nar/gkp917
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© The Author(s) 2009. Published by Oxford University Press.
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

Database Issue

Saccharomyces Genome Database provides mutant phenotype data

Stacia R. Engel1, Rama Balakrishnan1, Gail Binkley1, Karen R. Christie1, Maria C. Costanzo1, Selina S. Dwight1, Dianna G. Fisk1, Jodi E. Hirschman1, Benjamin C. Hitz1, Eurie L. Hong1, Cynthia J. Krieger1, Michael S. Livstone2, Stuart R. Miyasato1, Robert Nash1, Rose Oughtred2, Julie Park1, Marek S. Skrzypek1, Shuai Weng1, Edith D. Wong1, Kara Dolinski2, David Botstein2 and J. Michael Cherry1,*

1Department of Genetics, Stanford University, Stanford, CA and 2Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA

*To whom correspondence should be addressed. Tel: +650 723 7541; Fax: +650 723 7016; Email: cherry{at}stanford.edu

Received September 15, 2009. Accepted October 7, 2009.

The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org) is a scientific database for the molecular biology and genetics of the yeast Saccharomyces cerevisiae, which is commonly known as baker’s or budding yeast. The information in SGD includes functional annotations, mapping and sequence information, protein domains and structure, expression data, mutant phenotypes, physical and genetic interactions and the primary literature from which these data are derived. Here we describe how published phenotypes and genetic interaction data are annotated and displayed in SGD.


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