ABSTRACT
RVR/Rev-erb
[beta]
/BD73 is an orphan steroid receptor that has no known ligand in the `classical'
sense. RVR binds as a monomer to an element which consists of an A/T-rich sequence upstream of the consensus hexameric half-site. However, RVR does not activate transcription and blocks
transactivation of this element by ROR/RZR. The mechanism of RVR action remains
obscure, hence we used the GAL4 hybrid system to identify and characterize an
active transcriptional silencer in the ligand binding domain (LBD) of RVR. Rigorous deletion and mutational analysis demonstrated that this repressor domain is encoded by amino acids 416-449 of RVR. Furthermore, we demonstrated that efficient repression is
dependent on the so-called LBD-specific signature motif, (F/W)AKXXXXFXXLXXXDQXXLL (which spans loop3-4 and helix 4) and helix 5 (H5; identified in the crystal
structures of the steroid receptor LBDs). Although RVR is expressed in many
adult tissues, including skeletal muscle, and during embryogenesis, its physiological function in differentiation and mammalian development remains unknown. Since other `orphans
'
, e.g. COUP-TF II and Rev-erbA
[alpha]
, have been demonstrated to regulate muscle and adipocyte differentiation, we
investigated the expression and functional role of RVR during mouse myogenesis.
In C2C12 myogenic cells, RVR mRNA was detected in proliferating myoblasts and
was suppressed when the cells were induced to differentiate into post-mitotic, multinucleated myotubes by serum withdrawal. This decrease in RVR
mRNA correlated with the appearance of muscle-specific markers (e.g. myogenin mRNA). RVR `loss of function' studies by
constitutive over-expression of a dominant negative RVR
[Delta]
E resulted in increased levels of p21
Cip1/Waf1
and myogenin mRNAs after serum withdrawal. Time course studies indicated that
expression of RVR
[Delta]
E mRNA results in the precocious induction and accumulation of myogenin and p21
mRNAs after serum withdrawal. In addition, we demonstrated that over-expression of the COUP-TF II and Rev-erbA
[alpha]
receptors in C2C12 cells completely blocked induction of p21 mRNA after serum
withdrawal. In conclusion, our studies identified a potent transcriptional
repression domain in RVR, characterized critical amino acids within the
silencing region and provide evidence for the physiological role of RVR during
myogenesis.
Members of the nuclear receptor (NR) superfamily bind specific DNA elements and
function as transcriptional regulators (
1
,
2
). This group includes the `orphan receptors', which have no known ligands in
the `classical' sense and appear to be the ancient progenitors of this receptor
superfamily. The orphan receptor RVR/Rev-erb[beta]/BD73 is closely related to Rev-erbA[alpha], ROR/RZR[alpha] (retinoic acid receptor-related orphan receptor) and the
Drosophila
orphan receptor E75A, particularly in the DNA binding domain (DBD) and the
putative ligand binding domain (LBD). RVR, Rev-erbA[alpha] and ROR bind as monomers to an asymmetric (
A
/
T
)
6
RGGTCA motif. Furthermore, Rev-erbA[alpha] and RVR can repress constitutive transactivation from this motif
by ROR[alpha] (
3
,
4
). However, in contrast to ROR, RVR and Rev-erbA[alpha] do not activate transcription and mediate transcriptional repression of the Rev-erbA[alpha] promoter (
3
-
9
). RVR is expressed in the central nervous system, skeletal and dorsal muscles,
spleen and mandibular and maxillar processes (
3
,
4
,
6
,
7
). During embryogenesis RVR is expressed in the notochord and neural tube, but its
function/role during differentiation and mammalian development remains obscure.
Muscle differentiation is the process whereby proliferating myoblasts
permanently exit the cell cycle and fuse to become post-mitotic, multinucleated myotubes with a contractile phenotype and express
myogenic markers (reviewed in
10
,
11
). Insights into this process have been provided by the identification of a
group of basic helix-loop-helix (bHLH) proteins encoded by the
myoD
gene family (
myoD
,
myf-5
,
myogenin
and
MRF-4/myf-6/herculin
), which are muscle-specific transactivators that can direct cell fate, repress proliferation,
activate differentiation and the contractile phenotype and function at the
nexus of command circuits that control the mutually exclusive events of
division and differentiation (reviewed in
10
-
12
). Gene targetting studies have suggested that while MyoD and Myf-5 are required for determination (
13
), myogenin is specifically required for differentiation (
14
). MyoD forms heterodimers with the ubiquitously expressed E2A HLH gene
products. MyoD-E2A heterodimers bind to an E box motif (CANNTG), present in muscle-specific enhancers (reviewed in
10
,
11
). The MyoD heterodimeric complexes act in concert with a variety of other
ubiquitous (e.g. Sp1, CTF and SRF) and tissue-specific (e.g. MEF-2) transcription factors to regulate myogenic promoters (reviewed in
10
,
11
). Direct interaction of MyoD and myogenin with the nuclear retinoblastoma
phosphoprotein (RB) has been observed (
15
,
16
) and the binding of RB to MyoD is necessary to stabilize the DNA-bound (MyoD-E2A protein) heteromeric complex. RB activity is controlled by cell
division kinase (cdk) complexes with the D-cyclins (for a review see
17
). The activity of cdks are regulated at the level of synthesis of the subunit
partners (e.g. cyclins) of the complex, post-translational modification and by binding of inhibitors, including p21
Cip1/Waf1
(
18
,
19
). In C2 cells in culture, serum withdrawal induces differentiation, repression
of cyclin D1 and induction of p21 mRNA/protein (
15
,
20
-
23
). The critical role of these cell cycle regulators in myogenesis has been
demonstrated: (i) inhibition of myogenesis by forced expression of cyclin D1 results in phosphorylation and inhibition of MyoD function; (ii) ectopic expression of p21 in growing
myoblasts results in cell cycle arrest (
20
,
23
,
24
).
Recently two orphan receptors have been shown to have a functional role in
skeletal muscle differentiation. COUP-TF II and Rev-erbA[alpha], a closely related isoform of RVR, antagonize myogenesis,
repress MyoD mRNA expression and block induction of myogenin mRNA after serum
withdrawal (
25
,
26
). Hence we investigated the transcriptional characteristics of RVR utilizing the GAL4 hybrid system and examined the expression/functional role of RVR in:
(i) terminal skeletal muscle differentiation; (ii) regulation of MyoD/myogenin,
cyclin D1 and p21 mRNAs with respect to the characterized link between these
genes in differentiation and cell cycle control.
COS-1 or JEG-3 (human choriocarcinoma) cells were cultured for 24 h in DMEM
supplemented with 10% FCS in 6% CO
2
before transfection. Each 35 mm dish of COS-1 or JEG-3 cells (60-80% confluent) was transiently transfected with 2.5 [mu]g reporter plasmid DNA (G5E1bCAT) expressing
chloramphenicol acetyltransferase (CAT), mixed with 1 [mu]g pGAL0-RVR or pGAL4-VP16-RVR chimeras by the DOTAP-mediated procedure as described previously (
35
). Mouse myogenic C2C12 cells were grown in DMEM supplemented with 20% FCS in 6%
CO
2
. Each 35 mm dish of myogenic C2C12 cells (80-90% confluent) was transiently transfected in DMEM supplemented with 2%
FCS. Fresh medium was added to the cells after 24 h and cells were harvested
for assay of CAT activity 48 h after transfection. Each transfection was
performed at least three times to overcome variability inherent in
transfections.
C2C12 cells were stably transfected at ~40% confluence using the DOTAP (Boehringer Mannheim)-mediated procedure as described previously (
36
). Briefly, a 1 ml DNA/DOTAP mixture (containing 20 [mu]g pSG5-RVR[Delta]E, 1.5 [mu]g pCMV-NEO, 150 [mu]l DOTAP in 20 mM HEPES, 150 mM NaCl, pH 7.4) was
added to the cells in 25 ml fresh culture medium. The cells were then grown for
a further 24 h to allow cell recovery and for high level pCMV-NEO expression before selection. Stable transfectants were isolated after
7-14 days selection in DMEM supplemented with 20% FCS and 400 [mu]g/ml G418. The Rev-erbA[alpha] and COUP-TF II cell lines have been previously described (
25
,
26
).
GMUQ251, 5'-CGCGGATCCCACCATGGAGCTGAACGCAGGAGG-3'
GMUQ252, 5'-CGCGGATCCTTAAGGATGAACTTTAAAGGC-3'
GMUQ265, 5'-CGCGGATCCGTTCACGAGATGCTGTTCGAT-3'
GMUQ301, 5'-GCGCGTCGACATATG
T
/
A
CTG
G
/
T
A
/
G
CA
T
/
G
GA
A
/
G
ATCTGGGAAG-3'
GMUQ302, 5'-GCGTCTAGATGA
A
/
C
GCAAA
T
/
G
CG
T
/
C
ACCAT
T
/
C
A
A
/
G
A
/
C
A-3'
GMUQ303, 5'-GCGCGTCGACATATGTTTGC
A
/
C
AA
G
/
A
A
/
C
G
/
A
GAT
T
/
C
CC
T
/
C
GGC-3'
GMUQ304, 5'-GCGTCTAGAAGC
T
/
C
TT
T
/
A
A
A
/
G
CAG
A
/
G
T
/
G
T
G
/
C
ACCTG-3'
GMUQ307, 5'-GCGCGTCGACATATGGCTGGTGCT
A
/
C
G
/AGAT
T
/
C
CC
T
/
C
GGCTTC-3'
GMUQ308, 5'-GCGCGTCGACATATGGCTGATGCT
A
/
C
G
/
A
GAT
T
/
C
CC
T
/
C
GGCTTC-3'
Two primers, GMUQ251 and GMUQ252, were used to PCR amplify the 1731 bp open
reading frame of RVR from the parent plasmid pCMXRVR (
4
) with
UlTma
DNA polymerase (Perkin Elmer). This gave a fragment containing the 1731 bp open
reading frame of RVR with primer-derived
Bam
HI ends. This PCR fragment was cloned into
Sma
I-digested pBS and was called pBS-RVR. pGAL-RVR and pGAL4-VP16-RVR (GV-RVR) chimeras were created by inserting
fragments of RVR into the pGAL0 (
37
) and pGAL4-VP16 (
25
) vectors. pGAL0 contains the GAL4 DBD and pGAL4-VP16 contains the GAL4 DBD linked to the acidic activation domain of VP16.
The 1745 bp fragment of
Bam
HI-digested pBS-RVR was end-filled with Klenow and ligated with
Sal
I-digested, Klenow end-filled pGAL0 and pGAL4-VP16. To construct pGAL-RVR(1-88) and GV-RVR(1-88), the 1745 bp fragment of
Bam
HI-digested pBS-RVR was digested with
Hin
fI and the 273 bp fragment was end-filled with Klenow and cloned into
Sal
I-digested, Klenow end-filled pGAL0 and pGAL4-VP16. pGAL-RVR(1-276) and GV-RVR(1-276) were created by inserting the
Klenow end-filled, 837 bp fragment of
Sph
I/
Bgl
II digestion of the 1745
Bam
HI fragment from pBS-RVR into
Sal
I-digested, Klenow end-filled pGAL0 and pGAL4-VP16. To construct pGAL-RVR(170-576), a PCR fragment was prepared for insertion
into pGAL0. Two primers, GMUQ265 and GMUQ252, were used to PCR amplify this
region from the parent plasmid pCMX-RVR, as above, with
UlTma
DNA polymerase. This fragment was digested with
Bam
HI and cloned into
Bam
HI-digested pBSK
+
and was called pBSK-RVR(170-576). The 1236 bp insert generated by
Bam
HI digestion of pBSK-RVR(170-576) was cloned into
Bam
HI-digested pGAL0. pVP16-RVR(170-576) was prepared by ligating the end-filled, 1236 bp
Bam
HI fragment of pGAL-RVR(170-576) into
Xho
I-digested, Klenow end-filled pNLVP16 (
38
). GV-RVR(170-576) was prepared by ligating the 1274 bp
Sal
I-
Xba
I fragment of VP16-RVR(170-576) into
Sal
I/
Xba
I-cleaved pGAL4-VP16. To construct pVP16-RVR(178-353) and pVP16-RVR(355-576), the 1236 bp insert generated by
Bam
HI digestion of pGAL-RVR(170-576) was digested with
Eco
RI and the 564 and 675 bp fragments were end-filled with Klenow and cloned into
Xho
I-digested, Klenow end-filled pNLVP16. GV-RVR(178-353) and GV-RVR(355-576) were created by ligating the
Sal
I-
Xba
I fragment of pVP16-RVR(178-353) and the
Sal
I-
Xba
I fragment of pVP16-RVR(355-576) into
Sal
I/
Xba
I-cleaved pGAL4-VP16.
For construction of the following GV-RVR chimeras, the following primers were used to PCR amplify with
UlTma
DNA polymerase regions of RVR from GV-RVR(355-576): GV-RVR(394-449), GMUQ301 and GMUQ302; GV-RVR(416-449), GMUQ303 and GMUQ302; GV-RVR(394-437), GMUQ301 and GMUQ304;
GV-RVR(416-437), GMUQ303 and GMUQ304. The following primers were used to
create mutations in the FAK regions of GV-RVR(416-449): GV-RVR AGAR, GMUQ307 and GMUQ302; GV-RVR ADAN, GMUQ308 and GMUQ302. PCR amplification (Pfu
DNA polymerase, Stratagene) products from GV-RVR(355-576) containing primer-derived
Sal
I 5'-ends and
Xba
I 3'-ends were digested with
Sal
I/
Xba
I and ligated to
Sal
I/
Xba
I-digested pGAL4-VP16.
pSG5-RVR was created by ligating the
Bam
HI-cleaved 1745 bp fragment of pBS-RVR into
Bam
HI-digested pSG5. Sense and antisense clones were screened by
Eco
RI digestion. To create pSG5-RVR[Delta]E,
Sph
I/
Bgl
II-digested pGEX-1 RVR was end-filled with Klenow and the 837 bp
Bam
HI fragment was ligated into
Bgl
II-digested, end-filled,
Bam
HI-digested pSG5. Double-stranded sequencing of ligation junctions confirmed authenticity and
that the foreign protein was being expressed in-frame.
Cells were harvested and aliquots of the cell extracts were incubated at 37oC with 0.1-0.4 [mu]Ci [
14
C]chloramphenicol (ICN, Cleveland, OH) in the presence of 5 mM acetyl-CoA and 0.25 M Tris-HCl, pH 7.8. After a 0.2-4 h incubation period, the samples were analysed on silica
gel thin layer chromatography plates as described previously (
35
). Quantitation of CAT assays was performed with an AMBIS [beta]-scanner.
Rabbit anti-mouse cyclin D1 antibody (Santa Cruz no. sc-717) was used at a concentration of 1 [mu]g/ml for 1 h at room temperature. Rabbit anti-GAL4 antiserum (Santa Cruz no. sc-428) was used at a concentration of 1 [mu]g/ml overnight at 4oC. Extract preparation, electrophoresis,
transfer, non-specific blocking, washing and further steps were carried out with
Boehringer Mannheim ECL Western blotting detection reagents according to the
manufacturer's protocols, as described previously (
25
).
Total RNA was extracted by the acid guanidinium thiocyanate/phenol/chloroform
method (
39
). Poly(A)
+
RNA was extracted using an mRNA isolation kit (Boehringer Mannheim) from total
RNA using biotin-linked oligo(dT) and streptavidin-linked magnetic beads. Northern blots, random priming and
hybridizations were performed as described previously (
40
). The actin probes used were as described by Bains
et al.
(
41
). The mouse myogenin (
42
) and MyoD (
43
) cDNAs were excised from the pEMSVscribe (Moloney sarcoma virus)-based expression vectors. Mouse cyclin D1 was excised from pGEX-3X-CYL1 (
44
) and mouse p21 was excised from pCMW35, an unpublished clone encoding mouse p21
from the Vogelstein laboratory. The RVR cDNA probe was the sequence spanning bp
508-1731, encompassing the D and E regions, and was excised from GAL4-RVR(170-576) with
Bam
HI.
The literature to date on RVR indicated that this orphan receptor repressed
transcription of the Rev-erbA[alpha] promoter and suppressed the ability of ROR[alpha] to transactivate gene expression. These experiments were
all based on transfection assays. To elucidate the molecular basis of these transcriptional characteristics, we investigated the potential of RVR to modulate transcription by utilizing the
GAL4 hybrid system, whereby a putative transactivator is fused to the DBD of
the well-characterized yeast GAL4 protein. If active, the putative transactivator
induces transcription of the CAT reporter placed downstream of the GAL4 binding
sites. The system utilized an SV40 promoter expression vector with a multiple
cloning site downstream of the GAL4 DBD (amino acids 1-147) from which the activation domain had been deleted. We fused various
domains of the RVR protein to the GAL4 DBD to examine their effects on the
basal level of expression from an E1b promoter downstream of five copies of a
17mer GAL4 binding site linked to the CAT reporter.
As shown in Figure
1
A, the GAL4-RVR chimeras did not activate transcription of the G5E1bCAT plasmid. This
implies that RVR does not contain any modular activation domains. However, it
should be noted that RVR activity may be ligand dependent and to date no ligand
has been identified or characterized. There is a growing body of evidence that
the transactivating activity of steroid receptors can be modulated in a ligand-independent manner by phosphorylation events (
27
,
28
). It has been demonstrated that the N-terminus of Rev-erbA[alpha], which contains 50 serine/threonine residues out of 131,
possesses a phosphorylation-dependent N-terminal activation domain (
25
). The N-terminal AB region of RVR is serine rich (27/102 amino acids) and thus may
be a potential target for kinases. The above transfections were repeated in the
presence of 8-Br-cAMP, which activates cAMP-dependent protein kinases. This treatment did not improve the
ability of the GAL4-RVR chimeras to activate transcription and suggested that phosphorylation
by cAMP-dependent protein kinases does not activate RVR (data not shown).
Recent publication of the crystal structures for the LBDs of three members of
the steroid/thyroid receptor superfamily, thyroid hormone (TR), retinoic acid
(RAR) and retinoid X (RXR) receptors, have revealed a conserved structure
consisting of 12 [alpha]-helices (
30
-
32
). The smallest characterized repression domain of RVR (amino acids 394-449) identified would encompass H3, L3-4, H4 and H5 (see Fig.
2
A). The most conserved amino acids, or the so-called LBD-specific signature [(F/W)AKXXXXFXXLXXXDQXXLL], for the superfamily spans H3, L3-4 and H4 of the LBD domain (
33
). It has been proposed that this motif contributes to stabilization of the LBD
canonical structure. Therefore, we decided to investigate the contribution of
H3, H4 and H5 as well as the LBD-specific signature to the ability of RVR to repress transcription.
Next we wished to examine whether repression by RVR was cell specific. We
examined the ability of GV-RVR(355-576) and GV-RVR(416-449), both of which exhibit strong repression ability
in COS-1 cells, to repress transcription in C2C12 (mouse myogenic) and JEG-3 (human choriocarcinoma) cells. In both cell lines we observed that
both RVR(355-576) and RVR(416-449) strongly repressed transactivation by the GAL4-VP16 protein (~40- to 60-fold) (Fig.
2
E). This suggests that the cofactors involved in active transcriptional
silencing by RVR are not cell specific and are present in different cell types.
The Northern analyses demonstrated that RVR mRNA repression correlates with the
biochemical and morphological differentiation of myogenic cells that results in
transition from a non-muscle phenotype to a contractile phenotype. To examine the role of RVR
and to identify the probable target(s) of this orphan receptor in muscle cells
we proceeded to examine the effect of knocking out RVR function by constitutive
over-expression of a dominant negative RVR[Delta]E expression vector that lacked the E region (which encodes the
repression domain) in the C2C12 cell line. The construct pSG5-RVR[Delta]E (which contained RVR[Delta]E cloned in the sense orientation into pSG5) was co-transfected with pCMV-NEO. Stable transfectants were isolated as a
polyclonal pool of G418-resistant colonies (comprised of >20 individual resistant colonies). This cell line was called C2:RVR[Delta]E. The C2:RVR[Delta]E cell line produced abundant amounts of the
exogenous/transfected 0.9 kb RVR[Delta]E mRNA transcript, relative to the endogenous full-length 4.5 kb transcript (Fig.
3
B). Interestingly, the level of full-length RVR transcript is reduced 2.8-fold in the C2:RVR[Delta]E cell line relative to the GAPDH control. Furthermore, we
observed that bacterially expressed RVR[Delta]E protein bound the optimal monomeric (A/T)
6
AGGTCA motif more efficiently than the full-length native protein (data not shown).
To examine the effect of constitutive dominant negative RVR expression on
factors involved in determination (e.g. MyoD) and differentiation (e.g.
myogenin) we isolated total RNA from C2:RVR[Delta]E and normal C2C12 proliferating myoblasts (PMB) and myotubes (MT-4) before and after 96 h of serum withdrawal respectively. These
RNAs were Northern blotted and probed with 18S rRNA, cytoskeletal/non-muscle [beta]- and [gamma]-actins and sarcomeric/striated [alpha]-skeletal and [alpha]-cardiac actin, MyoD,
myogenin, cyclin D1 and p21 labelled cDNAs (Fig.
3
C). These probes enabled us to determine the impact of constitutive dominant
negative RVR expression on important markers of myogenesis.
We noted that the rate of differentiation was enhanced upon serum withdrawal and
more multinucleated myotubes were formed in cells overexpressing RVR[Delta]E mRNA compared with the parent C2C12 cell line. The absolute levels of
myogenin and p21 mRNA were significantly enhanced in C2:RVR[Delta]E cells after 96 h of serum withdrawal (MT-4 myotubes 4 days) (Fig.
3
C), in accordance with the enhanced morphological differentiation of these
cells. The level of cyclin D1 mRNA in proliferating myoblasts was lower,
relative to the level in native cells. Furthermore, expression of p21 was
elevated in both myoblasts and in myotubes (on a background of normal MyoD mRNA
levels), reflecting the increased ability to differentiate and demonstrating
that p21 mRNA levels are influenced by RVR during myogenesis.
To examine whether the elevated levels of myogenin and p21 mRNAs in the C2:RVR[Delta]E cell line were due to an acceleration of terminal differentiation, we
conducted a time course study. We isolated total RNA from C2 and C2:RVR[Delta]E cells as proliferating myoblasts (PMB), confluent myoblasts (CMB,
harvested 24 h after the harvesting of PMB cells) and +4, +8 and +24 h after
serum withdrawal in differentiation medium (DM) [(i.e.
4, 8 and 24 h after harvesting of the CMB sample in growth medium (GM)].
Northern analysis clearly demonstrated that terminal differentiation is accelerated in the C2:RVR[Delta]E cell line. Myogenin is strongly expressed after 4 h in the C2:RVR[Delta]E cell line, whereas in native C2 cells expression is not observed
until 24 h after serum withdrawal (Fig.
3
D). In fact, myogenin mRNA is spontaneously induced by cell contact in the
C2:RVR[Delta]E cell line in growth medium (GM). p21 mRNA is induced 4 h after serum
withdrawal in the C2:RVR[Delta]E line, in contrast to the native C2 cell line, where p21 mRNA is not
induced until 8 h after serum withdrawal. These studies demonstrate that
terminal differentiation is accelerated in the C2:RVR[Delta]E cell line and the markers of myogenic differentiation are precociously
induced.
As previously mentioned, two other `orphans', COUP-TF II and Rev-erbA[alpha], that are expressed in proliferating myoblasts have recently
been demonstrated to antagonistically regulate muscle differentiation in
culture, repress MyoD mRNA expression and abrogate the induction of myogenin
mRNA after serum withdrawal (
25
,
26
). We decided to investigate whether over-expression of sense (S) and antisense (AS) COUP-TF II and Rev-erbA[alpha] cDNAs in the cell lines C2:COUP-TF II S, C2:COUP-TFII AS, C2:Rev-erbA[alpha] S and C2:Rev-erbA[alpha] AS (described
previously;
25
,
26
) affected p21 mRNA and cyclin D1 protein expression during myogenesis.
In the cell line C2:COUP-TFII S, stably transfected with pSG5 COUP-TFII S, the induction of p21 mRNA by serum withdrawal was completely
blocked (Fig.
4
A). Interestingly, the levels of cyclin D1 protein in the myoblasts of this cell
line are elevated relative to the levels in normal C2 cells (Fig.
4
B). These observations correlate with the absence of MyoD and myogenin mRNA in
the C2:COUP-TFII S cell line (
26
). Curiously, constitutive expression of antisense COUP-TFII in the cell line C2:COUP-TF II AS did not lead to greater induction of p21 mRNA after serum
withdrawal, but resulted in a slight reduction in cyclin D1 protein levels in
these myoblasts compared with cyclin D1 levels in native C2 cells.
Previous studies have demonstrated that Rev-erbA[alpha] (closely related to RVR, 97% in the DBD and 68% in the LBD)
possesses both an N-terminal phosphorylation-dependent activation domain (
25
) and a strong repressor domain located in the C-terminus (
25
,
34
). Our work with the GAL4 hybrid system indicates that RVR does not possess an
activation domain, but does contain a potent transcriptional silencing domain
within the C-terminal putative LBD/E region (between amino acids 416 and 449).
Repression by this region was not relieved by an activator of cAMP-dependent kinases, 8-Br-cAMP. Although RVR contains serine-rich regions in the N-terminus, the lack of sequence homology in the N-terminal regions between RVR and Rev-erbA[alpha] and the low percentage of
glutamines and prolines may explain the differences in
trans
-acting potential.
Our studies indicate that RVR possesses a potent transcriptional repression
domain in the E region of the orphan receptor that functions in different cell
types. Recently reported crystal structural studies on the TR, RXR and RAR LBDs
and detailed nuclear receptor (NR) amino acid residue alignments have
identified a NR-specific signature in this region (
33
). This motif, (F/W)AKXXXXFXXLXXXDQXXLL, contains most of the conserved amino acid residues that stabilize the core of the canonical fold of NR LBD
domains. The amino acids that encode the repression function of RVR (amino
acids 416-449) are found in a domain that forms [alpha]-helices 3, 4 and 5 (and L3-4) of the putative LBD region and encompasses the LBD
signature motif. It has been proposed that this region forms a hydrophobic
pocket in the LBD core. Our data confirms the importance of this motif, as
mutation of the FAK residues impairs the silencing effects of this region.
Furthermore, our studies demonstrated that H5 was necessary for RVR function.
The importance of H5 to NR function is highlighted from natural mutations in
this region of other NRs that lead to generalized resistance to thyroid
hormone, partial and complete androgen insensitivity syndrome and testicular
feminization (
33
and references therein). Structural analysis of TR/RAR/RXR indicates that this
region is buried inside the receptor. Whether this is the case with RVR, which
does not contain H12 (the AF-2 domain), remains to be determined. Curiously, this domain is very highly
conserved (Fig.
2
A) within the Rev-erb family, with only one amino acid difference found in the Rev-erbA[alpha] receptor (amino acids 455-488). This is in agreement with the reported
transcriptional repression properties of both orphan receptors. Whether the
domain we have defined between amino acids 416-449 of RVR directly represses transcription or functions as a repression
interface for another molecule is not currently clear.
Our studies also indicate a biological role for RVR in mammalian
differentiation. We demonstrated that proliferating C2C12 myoblasts expressed
RVR mRNA, which was repressed when cells were induced to differentiate by serum
withdrawal into multinucleated myotubes that express a contractile phenotype.
RVR `loss of function' studies in a cell line that constitutively expressed an
RVR[Delta]E mRNA (which lacked the identified functional repression domain)
indicated that the process of differentiation was accelerated. This observation
correlated with increased levels and the precocious induction of p21
Cip1/Waf1
and myogenin mRNA in these cells, which encode a cdk inhibitor and HLH protein
respectively. These RVR `loss of function' studies indicated that RVR plays a
significant role in the cascade of events that antagonistically regulate
myogenesis. The importance of functional orphan receptor expression in the
regulation of myogenesis was highlighted by the inhibition of p21 mRNA
induction after serum withdrawal in cell lines that constitutively over-express either COUP-TF II or Rev-erbA[alpha]. Over-expression of these orphan receptors has been
previously demonstrated to abrogate induction of myogenin mRNA after serum
withdrawal (
25
,
26
). Furthermore, in a cell line that constitutively expressed antisense COUP-TF II cDNA (
26
), we observed significantly increased levels of myogenin mRNA after serum
withdrawal, similar to the effect of over-expression of RVR[Delta]E in C2C12 cells. These studies suggest that this group of orphan
steroid receptors (COUP-TF II, Rev-erbA[alpha] and RVR), which have been demonstrated to function as
transcriptional repressors, may play a co-ordinated role in the antagonistic regulation of myogenesis and
maintenance of the proliferative state. This group of closely related `orphan'
repressors directly or indirectly regulate and target induction/expression of
p21 and myogenin mRNA. The expression of these genes, as demonstrated by many
other studies, is critical to cell cycle exit and transactivation of the
myogenic programme respectively (
14
,
20
,
23
).
It has been demonstrated that MyoD may induce terminal cell cycle arrest and
maintenance of the post-mitotic state during muscle differentiation by increasing the expression
of p21 (
20
,
21
). The possibility exists that the orphan steroid receptors (RVR, COUP-TF II and Rev-erbA[alpha]) indirectly block induction of p21 during myogenesis, via
suppression of MyoD mRNA. Over-expression of COUP-TF II and Rev-erbA[alpha] suppresses the levels of MyoD mRNA and blocks cell cycle exit and
biochemical differentiation (
25
,
26
). However, we note that in the cell line C2:RVR[Delta]E expression of p21 mRNA was precociously induced after serum withdrawal
in a background of normal MyoD mRNA levels. The cdk inhibitor p21 is induced
during myogenesis (
20
-
22
), as well as in other cells undergoing terminal differentiation, including
cartilage, skin and nasal epithelium (
22
). Over-expression of p21 in C2C12 cells inhibits myoblast proliferation and
reverses the inhibition of muscle-specific gene expression in mitogen-rich medium (
20
,
23
). Thus the regulation of p21 expression by the `orphans' may subsequently
affect the function of the cyclin D-cdk4 complex. Certainly, in cells over-expressing a dominant negative RVR (that had an accelerated rate of
differentiation) the levels of cyclin D1 mRNA were lower. Analogously, cells
that over-expressed COUP-TF II expressed higher levels of cyclin D1 protein in proliferating
myoblasts. Whether, the effects on p21 are mediated purely by inhibition of
MyoD expression/function is not clear at present.
In conclusion, RVR, COUP-TF II and Rev-erbA[alpha] function as transcriptional repressors that antagonistically
regulate HLH and p21 gene expression during muscle differentiation by
influencing the decision to `divide or differentiate'.
We sincerely thank Drs Charles Sherr and Bert Vogelstein for providing cDNA
clones encoding cyclin D1 and p21. This work was supported by the National
Health and Medical Research Foundation of Australia. The Centre for Molecular
and Cellular Biology is a special research centre of the Australian Research
Council.
REFERENCES
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