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Cap ribose methylation of c-mos mRNA stimulates translation and oocyte maturation in Xenopus laevis
Introduction
Materials And Methods
Oocytes
RNA and protein
Preparation of cap I
Generation of 7mG antisera and immunoselection of RNA
Measurement of translational efficiency
Results
Progesterone induces c-mos mRNA cap ribose methylation
Inhibition of cap ribose methylation by SIBA blocks translational activation of endogenous c-mos mRNA
Cyclin A and B mRNAs rescue the SIBA block to oocyte maturation
Cap ribose methylation stimulates translation
Discussion
Cap I is an enhancer of translation
Acknowledgements
References
Cap ribose methylation of c-mos mRNA stimulates translation and oocyte maturation in Xenopus laevis
ABSTRACT
INTRODUCTION
The c-mos proto-oncogene product plays a key role in the control of vertebrate oocyte meiosis (1,2). In Xenopus oocytes, Mos appears to have at least three functions: (i) it stimulates re-entry into the meiotic divisions (oocyte maturation) (3,4); (ii) it suppresses DNA replication after meiosis I (5); and (iii) it promotes meiotic arrest after meiosis II (6). Mos is a serine/threonine kinase that initiates a cascade of events culminating in the activation of maturation promoting factor (MPF), a heterodimer composed of p34cdc2 kinase and cyclin B. It is active MPF that is directly responsible for the morphological changes that occur during maturation, such as chromatin condensation and germinal vesicle breakdown (1,2). Although full-grown oocytes have no Mos protein, they do contain translationally dormant c-mos mRNA that is activated soon after the oocytes are exposed to progesterone, the primary stimulus of maturation (3). Translational control of c-mos RNA, therefore, is an essential regulatory step in early development.
c-mos is one of several mRNAs whose translation is induced by cytoplasmic polyadenylation (7,8). In this process, quiescent mRNAs in oocytes have relatively short poly(A) tails, usually fewer than 20 nt. Following the induction of maturation by progesterone, the poly(A) tails of these messages are elongated and translation ensues (9). Two cis-acting elements in the 3[prime] untranslated regions (UTRs) of responding mRNAs are necessary for cytoplasmic polyadenylation in maturing oocytes: the consensus sequence UUUUUAU (cytoplasmic polyadenylation element, CPE) and the polyadenylation hexanucleotide AAUAAA (9-11). The factor that binds the CPE, CPEB (12-14), is necessary for polyadenylation (13,15), and may act by recruiting additional factors to the AAUAAA (16), which in turn probably recruits the poly(A) polymerase.
Recent evidence demonstrates an interesting link between 3[prime] poly(A) addition and a 5[prime] cap-specific modification, and provides a clue as to how maternal mRNA translation could be regulated. Using oocyte histone B4 mRNA as a model, Kuge and Richter (17) showed that the cap 0 structure (7mGpppN) of this transcript was converted, in a maturation- and polyadenylation-dependent manner, into cap I (7mGpppNm) and cap II (7mGpppNmNm) forms by 2[prime]-O-methylation of the penultimate and third nucleotides. The inhibition of these modifications substantially lowered the translational activation of this mRNA during oocyte maturation (17). Whether cap ribose methylation has important implications for early development, or whether it is sufficient to stimulate translation in the absence of polyadenylation, was not addressed.
In this study, we have explored these questions by examining the possible cap ribose methylation of c-mos mRNA. Injected c-mos RNA undergoes polyadenylation and cap ribose methylation. S-isobutylthioadenosine (SIBA), a methyltransferase inhibitor, has little effect on c-mos RNA polyadenylation or general protein synthesis, but completely abrogates 2[prime]-O-methylation of this RNA, and prevents Mos synthesis and oocyte maturation. However, the injection of cyclin mRNAs, which act downstream of Mos, rescues oocyte maturation to normal levels, indicating the lack of a non-specific toxic effect by SIBA. We have also prepared cap 0- and cap I-containing luciferase and c-mos mRNAs in vitro and injected them into oocytes. A comparison of the translation of these mRNAs demonstrates that cap I is a potent enhancer of translation and oocyte maturation. The implications of cap-specific 2[prime]-O-methylation for translation and early development are discussed.
MATERIALS AND METHODS
Oocytes
Xenopus oocytes were isolated as described (17) and cultured in Bath's medium in the absence or presence of 10 µM progesterone. For the inhibitor studies, oocytes were pre-incubated with the indicated concentrations of SIBA for 2 h. After injection of RNA, the oocytes were cultured for 6 h in the presence of the inhibitor.
RNA and protein
The RNA substrates for the methylation and polyadenylation assays were synthesized by SP6 RNA polymerase with the inclusion of cap analog (7mGpppG) and [[alpha]-32P]GTP (3000 Ci/mmol) (18). Plasmid DNA for substrate B was constructed by joining the BbsI-EcoRI fragment of pXmos8 (3) to HindIII and EcoRI-digested pSP64 (Promega) through one blunt-end ligation. The second base from the transcription start site of this DNA was changed from adenine to guanine as described (17) for templates A and S. Before transcription, DNAs were digested with EcoRI (templates A and B) or SspI (for substrate S). Clam cyclin A and B mRNAs were synthesized as described (19). The polyadenylation and methylation assays have been presented (17). Briefly, for the methylation assay, total RNA was recovered from injected oocytes and divided into two portions (one for the methylation assay and the other for the polyadenylation assay), digested to completion with RNase T2 and then with calf intestinal alkaline phosphatase. The digests were separated on a 20% acrylamide/8 M urea gel and analyzed on a phosphorimager. The cap I marker for the methylation assay was generated by adding a cap structure to a 2[prime]-O-ribose methylated RNA oligomer (ppGmAAUACUCAAG) with guanylyltransferase (BRL) and [[alpha]-32P]GTP (20). To quantify methylation efficiency, the radioactivity in the polyadenylated RNA with a tail of >20 residues was measured in a phosphorimager after gel electrophoresis, and was compared to the radioactivity in the cap I and cap II bands. Because 2.2% of the [[alpha]-32P]GMP in the RNA is in the cap, the proportion yields the percentage of cap specific 2[prime]-O-methylation. Furthermore, the quantification of polyadenylation and cap ribose methylation was derived from RNA extracted from the same group of injected oocytes, and thus there is no difference in sample recovery.
Western analysis with Mos antibody (Santa Cruz) was described (21). Protein synthesis in SIBA-treated oocytes was measured by trichloroacetic acid precipitation of protein following metabolic labeling with [35S]methionine (1000 Ci/mmol) (17).
Preparation of cap I
The capped 7mGppp-oligoribonucleotides were prepared by adding cap to a chemically-synthesized diphosphorylated RNA-oligomer (ppGAAUACUCAAG) or to a 2[prime]-O-ribose methylated RNA-oligomer (ppGmAAUACUCAAG) (20) by guanylyltransferase (BRL) in 50 mM Tris-HCl pH 7.9, 1.25 mM MgCl2, 6 mM KCl, 2.5 mM DTT, 4 U/µl RNasin (Promega), 0.5 pmol/µl RNA oligo, 6 mCi/ml [[alpha]-32P]GTP, 5 µM S-adenosylmethionine (SAM) and 0.5 U/µl guanylyltransferase for 45 min at 37°C as described (20). Plasmid DNA for the luciferase coding region was created by ligating the SacI-XbaI fragment of pGL3-basic (Promega) to SacI and XbaI-digested pBluescript(KS) (Stratagene). Plasmid DNA for the c-mos coding region was created by ligating the EcoRI-SalI fragment of pMALcRI-Xe (21) to EcoRI and SalI digested pBluescript(SK). This plasmid DNA was linearized with EcoRI before transcription with T3 RNA polymerase. The 5[prime] ends of luciferase and c-mos RNAs were converted into monophosphate form by treatment with tobacco acid pyrophosphatase (TAP) (Epicentre) in 50 mM sodium acetate pH 5.0, 0.1% [beta]-mercaptoethanol, 1 mM EDTA, 0.01% Triton X-100, 0.1 pmol/µl RNA and 0.3 U/µl TAP for 2 h at 37°C. Ligation of a capped RNA oligomer to the luciferase or c-mos RNA was performed as described (22) with some modifications. The ligation conditions were: 33 mM Tris-acetate, pH 7.8, 66 mM potassium acetate, 10 mM magnesium acetate, 20 mM dithiothreitol, 1 mM ATP, 0.5 mM capped RNA oligomer, 0.5 µM luciferase or c-mos RNA, 0.5 µM bridge DNA oligomer (CCAATTCGCCCCTTGAGTATTC for luc) or (CTTTTGTTCCCCTTGAGTATTC for c-mos), 1 U/µl T4 DNA ligase (Epicentre), incubated for 12 h at 16°C. The DNA was then removed by DNase treatment.
Generation of 7mG antisera and immunoselection of RNA
Antigen preparation to generate rabbit immune serum against 7mG has been presented (23). Briefly, 7mG was conjugated to BSA by dissolving the nucleotide in 0.1 M NaIO4, and then removing excess NaIO4 with ethylene glycol. This was added to BSA and mixed for 45 min using 5% potassium carbonate to maintain pH 9. Following a further incubation in NaBH4, formic acid was added and the pH adjusted to 8.5 with NH4OH. The mixture was dialyzed and used to immunize rabbits. Capped RNA was immunoselected with antibody bound to protein A Sepharose essentially as described by Yang et al. (24). The cap structure of immunoselected RNA was analyzed by digestion with nuclease P1 and cellulose TLC (25).
Measurement of translational efficiency
The stability and translation of the ligated luciferase mRNA in oocytes was measured by injecting 10 pg mRNA into oocytes in the absence of progesterone. After a 6 h incubation, RNA was extracted and analyzed by electrophoresis on a 5% polyacrylamide/8 M urea gel and phosphorimaging. Luciferase assays were performed with a kit (Promega) following the manufacturer's instructions.
RESULTS
Progesterone induces c-mos mRNA cap ribose methylation
A portion of the c-mos 3[prime] UTR containing both the CPE and hexanucleotide AAUAAA was synthesized in vitro in the presence of both [[alpha]-32P]GTP and 7mGpppG to provide a capped, internally-labeled transcript (Fig.
Figure 1. Progesterone induces polyadenylation and cap ribose methylation of c-mos mRNA. Polyadenylation (A) and cap ribose methylation (B) of c-mos mRNA were examined by injection of substrate RNA A (lanes 1 and 2) or B (lane 3), which contain a part of 3[prime]UTR of c-mos mRNA, into oocytes in the absence (lane 1) or presence (lanes 2 and 3) of progesterone. The circled p refers to the radioactive phosphate labeled by [[alpha]-32P]GTP. Polyadenylation (C) and cap ribose methylation (D) were also examined with a wild type RNA (DNA template cleaved with EcoRI, substrate A) (lanes 1 and 2) or a part of the 3[prime]UTR of c-mos mRNA that lacks CPE/ Hex (DNA cleaved with SspI, substrate S) (lane 3). Lane N shows the assays performed on substrates A without injection. Lane M shows the molecular marker of cap I. In (B) and (D), a band that migrates faster than cap I is evident. Although the origin of this band is unknown, it is not derived from the phosphate between the second and third bases and is not progesterone-dependent. To examine cap ribose methylation, we used an assay based on the resistance 2[prime]-O-methylation confers to RNase T2 hydrolysis (17). Total RNA from oocytes injected with the 32P-labeled RNAs was digested to completion with RNase T2, followed by treatment with alkaline phosphatase to remove 3[prime] phosphates. The products were resolved on a denaturing 20% polyacrylamide gel and visualized on a phosphorimager. Figure Template DNAs were also linearized with EcoRI (substrate A) or SspI (substrate S) so that the resulting transcripts do or do not contain the CPE and hexanucleotide (Fig.
Inhibition of cap ribose methylation by SIBA blocks translational activation of endogenous c-mos mRNA
To investigate the possible involvement of cap ribose methylation in the translation of c-mos mRNA, oocytes were incubated with SIBA, a methyltransferase inhibitor (17). Figure
Figure 2. Inhibition of cap ribose methylation by SIBA abolishes progesterone-induced Mos synthesis and oocyte maturation. Oocytes were treated with the indicated concentrations of SIBA in the absence (lane 1) or presence (lanes 2-6) of progesterone, and analyzed for the polyadenylation (A) and methylation (B) of injected c-mos RNA. Lanes M and N are as indicated in Figure 1B. In parallel, the synthesis of endogenous Mos (C), or protein in general (D), were examined by a western blot probed with Mos antibody, and metabolic labeling of oocytes with [35S]methionine, respectively. GVBD after 6 h of progesterone treatment was scored by the appearance of a white spot at the animal pole (E). The bars represents the mean " SD (three experiments).
Cyclin A and B mRNAs rescue the SIBA block to oocyte maturation
To determine whether the above results could be due to toxic effects of SIBA, rescue experiments were attempted by injecting molecules that act downstream of Mos (Fig.
Figure 3. Cyclin A and B mRNAs induce GVBD in the presence of SIBA. Oocytes were pre-incubated with control medium (lane 1) or medium containing 0.5 mM SIBA (lanes 2-4), followed by incubation with progesterone (10 µM, lane 1), or injection of 5 ng cyclin A mRNA (lane 3) or 5 ng cyclin B mRNA (lane 4). GVBD was scored as in Figure 2.
Cap ribose methylation stimulates translation
To address the importance of cap ribose methylation in translational regulation without the use of inhibitors, we compared the translational efficiencies of cap 0- and cap I-terminated versions of mRNA. To prepare these, we developed a regimen that includes the chemical synthesis of an RNA oligomer containing a 5[prime]-terminal 2[prime]-O-methylated nucleotide (for cap I) (20), followed by enzymatic capping (20), and ligation to the luciferase reporter mRNA (22) (Fig.
Figure 4. Preparation of mRNA containing cap I. (A) Schematic diagram of the preparation of a reporter mRNA with 2[prime]-O-methylated cap. The capped 7mGppp-oligoribonucleotides were prepared by adding a cap structure to a chemically synthesized, diphosphorylated and 2[prime]-O-ribose methylatedRNA-oligomer by guanylyltransferase with GTP and SAM. The circled M refers to 2[prime]-O-ribose methylation, and p and HO refer to contaminating oligonucleotides with monophosphate and hydroxyl 5[prime] ends. The 5[prime] end of luciferase RNA was converted into monophosphate form by treatment with tobacco acid pyrophosphatase. Ligation of a capped RNA oligomer to the luciferase RNA was performed with T4 DNA ligase in the presence of complementary bridging DNA oligomer. After the ligation, the desired products were immunoselected with anti-7mG antibody. (B) Anti-7mG antibody isolates 7mGpppG from GpppG. 5[prime] diphosphorylated RNA oligomer was capped by guanylyltransferase with SAM and [[alpha]-32P]GTP. The product was digested with nuclease P1 before (lane 1) or after (lane 2) isolation with 7mG antibody, and analyzed by cellulose TLC. (C) 7mG antibody selects the ligation product from non-ligated coding region. Radiolabeled luciferase coding region was ligated without capped RNA oligomer (lane 1) or with cap 0 RNA oligomer (lane 2) or cap I RNA oligomer (lane 3), immunoselected with 7mG antibody, and analyzed on a polyacrylamide gel. To ensure that this antibody was 7mG-specific, RNA oligomers were capped with [[alpha]-32P]GTP and SAM. They were immunoprecipitated with the 7mG antibody, digested with nuclease P1, and the products resolved by TLC and visualized by phosphorimaging (Fig. Identical amounts of radiolabeled poly(A)-deficient chimeric luciferase mRNAs containing cap 0 or cap I were injected into oocytes. RNA was extracted 6 h later and the relative stability of the two luciferase messages was shown to be equivalent (Fig. Figure 5. Cap ribose methylation enhances translation in the absence of poly(A). Radiolabeled luciferase mRNAs with cap 0 (lane 1) or cap I (lane 2) were injected into oocytes without progesterone treatment. Total RNA was isolated 6 h later, and the labeled RNA was analyzed by gel electrophoresis and phosphorimaging. In addition, the overall quality of extracted RNA is shown by ethidium bromide staining (inset). Translational efficiency of the luciferase mRNAs with cap 0 (lane 1) or cap I (lane I) were measured in oocytes without progesterone treatment. The mean of six experiments " SD is presented. The 4.4-fold difference is statistically significant (P < 0.01). Similar injection experiments were performed with c-mos mRNA ligated to the capped oligomers, but here the incidence of oocyte maturation, in the absence of progesterone, was determined (Fig.
Figure 6. c-mos mRNA with cap I is an effective inducer of oocyte maturation. (A) Three concentrations of c-mos mRNA containing cap 0 or cap I, but no poly(A) tail, were injected into oocytes with no progesterone treatment. GVBD was scored by the appearance of a white spot at the animal pole. (B) Other oocytes were injected with radiolabeled cap 0 or cap I-containing c-mos mRNA, which was then extracted and analyzed. In addition, the overall quality of the extracted RNA was determined by ethidium bromide staining of rRNA, which also served as a loading control.

DISCUSSION
Four main conclusions can be drawn from this study: (i) injected c-mos mRNA 3[prime] UTR undergoes cap ribose methylation during oocyte maturation; (ii) polyadenylation and translation of c-mos mRNA can be uncoupled by a methyltransferase inhibitor; (iii) cap ribose methylation enhances translation in vivo in the absence of poly(A); and (iv) cap ribose methylation enhances the rate of oocyte maturation by c-mos mRNA in the absence of progesterone.
One key reagent used in these studies was SIBA, a stable analogue of the SAM metabolite S-adenosylhomocysteine that is an inhibitor of methyltransferase reactions (26). While SIBA had little effect on c-mos mRNA polyadenylation or overall protein synthesis, it abolished the cap ribose methylation of this message and prevented both Mos synthesis and oocyte maturation in a similar dose-dependent manner. However, because it was formally possible that SIBA had some non-specific effect that obviated oocyte maturation, we performed rescue experiments by injecting two in vitro synthesized cyclin mRNAs, which act downstream of Mos. Both mRNAs consistently induced oocyte maturation, demonstrating that SIBA had no deleterious influence on the ability of oocytes to translate mRNA, or any of the metabolic reactions that lead to oocyte maturation. These data suggest that c-mos mRNA translation, and resulting oocyte maturation, is dependent upon cap ribose methylation. Finally, and most importantly, biochemical and biological assays used to test the in vivo translational efficiencies of two mRNAs containing cap 0 and cap I showed that cap-specific 2[prime]-O-methylation enhances translation in the absence of poly(A).
Cap I is an enhancer of translation
Luciferase mRNA with cap I is translated 4.4-fold more efficiently than with cap 0. This stimulation is about the same as that which occurs with injected mRNAs that are poly(A) elongated during oocyte maturation (9,27). In contrast, poly(A) (28) and 2[prime]-O-methylation (29) enhance translation by <50% in reticulocyte lysates, and point to the fact that in vitro translation systems can be notorious for their lack of regulation. In addition, this could be due to an excess translational capacity in vitro, whereas in oocytes, message levels far exceed the cell's protein synthesis capabilities (30). Finally, we should note that both cap I and cap II structures are detected in mature oocytes (e.g. Fig.
Because some studies have shown that a poly(A) can enhance translation oocytes (e.g. 31), we injected a luciferase mRNA that contained both cap I and a poly(A) tail. However, the translational enhancement was not additive with the two modifications (data not shown). This may be related to the time the oocytes are cultured (31), or to the possibility that not all reporter mRNAs associate with the translational apparatus in an identical manner.
Although cap ribose methylation enhances the translation of injected c-mos mRNA, it is obviously not essential (Fig.
Injected c-mos mRNA, like injected Mos protein (3,4), is an efficient inducer of oocyte maturation. Moreover, it has been shown that Mos protein induces maturation in oocytes incubated in the presence of cycloheximide (reviewed in 2), which indicates that this protein is all that is necessary for maturation. However, oocytes incubated in SIBA and injected with Mos do not mature (H.Kuge and J.D.Richter, unpublished data), even though they are competent to do so (Fig.
How cap ribose methylation stimulates translation is unclear, but one factor that might be involved is eIF-4E, the cap binding protein. The three-dimensional structure of cocrystals of eIF-4E and 7mGDP has been examined (32). Like vaccinia VP39, a viral cap-specific methyltransferase (33), the protein contains a cleft that could accommodate 7mGpppN, where N is any nucleotide, and thus could potentially recognize a methylated ribose moiety of cap I and cap II. It is also possible that different isoforms of eIF-4E recognize cap I, which could stimulate translation of specific messages. For example, the phosphorylation of eIF-4E increases its affinity for the cap (34), which may be potentiated by ribose methylation. Experiments are underway to determine the role eIF-4E might play in cap I-enhanced translation.
Another question is how 3[prime] poly(A) addition stimulates cap ribose methylation. Prior studies show that the mRNA cap-specific 2[prime]-O-methyltransferase of vaccinia virus is encoded by the same polypeptide chain as the vaccinia poly(A) polymerase processivity factor (25,35), and that it heterodimerizes specifically with the viral poly(A) polymerase catalytic subunit (36). This highlights the possibility of an advantageous connection between poly(A) tail elongation and cap-specific 2[prime]-O-methylation in the cytoplasm of eukaryotic cells, perhaps even oocytes. This is, if the oocyte poly(A) polymerase is also bound to a cap-specific ribose methyltransferase, one could imagine message circularity as the two ends of the mRNA come into close proximity mediated by the enzymes. Therefore, only mRNAs undergoing polyadenylation will be cap ribose methylated. This is consistent with the observation that only an mRNA in the active process of poly(A) addition undergoes cap ribose methylation (17). Clearly, the isolation and cloning of an oocyte cap-specific 2[prime]-O-methyltransferase would help in determining whether this is the case.
Acknowledgements
We thank M.J. Moore for helpful advice on the ligation conditions and members of the Richter laboratory and A. Inoue for comments on the manuscript. H.K. was supported by a postdoctoral fellowship from the American Cancer Society, Massachusetts Division, Inc. This work was funded by grants from the NIH (to J.D.R.).
REFERENCES
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