Skip Navigation

This Article
Right arrow Abstract Freely available
Right arrow Print PDF (17K) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (155)
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Brown, J. W.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Brown, J. W.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research Pages 314-314  

The Ribonuclease P Database
Introduction
Description
Availability
Plea For Help
Acknowledgements
References

The Ribonuclease P Database

The Ribonuclease P Database

James W. Brown*

Department of Microbiology, North Carolina State University, Raleigh, NC 27695, USA

Received September 21, 1998; Accepted September 23, 1998

ABSTRACT

Ribonuclease P is responsible for the 5[prime]-maturation of tRNA precursors. Ribonuclease P is a ribonucleoprotein, and in bacteria (and some Archaea) the RNA subunit alone is catalytically active in vitro, i.e. it is a ribozyme. The Ribonuclease P Database is a compilation of ribonuclease P sequences, sequence alignments, secondary structures, three-dimensional models and accessory information, available via the World Wide Web at the following URL: http://www.mbio.ncsu.edu/RNaseP/home.html

INTRODUCTION

Ribonuclease P (RNase P) is the ribonucleoprotein endonuclease that cleaves transfer RNA precursors, removing 5[prime] precursor sequences and generating the mature 5[prime] terminus of the tRNA (reviewed in 1). RNase P is also implicated in the processing of other RNA precursors. In bacteria, in which RNase P is best understood, the holoenzyme consists of two subunits, an RNA of ~400 nucleotides (140 kDa) and a protein of ~120 amino acids (14 kDa) (2). The RNA is the catalytic subunit of the enzyme; the bacterial RNase P RNA subunit alone is catalytically proficient, at high ionic strength in vitro (3). In the last few years, the number and diversity of RNase P RNA sequences available has increased dramatically.

On a yearly basis since 1991, RNase P RNA sequence alignments and secondary structures have been compiled and distributed in an informal publication, `The Book of P', providing a single source for comparative information. In 1994 the Ribonuclease P Sequence Database was established as an electronic means of distributing the Book of P, and in 1997 the Book of P was entirely converted to a web-based format. In its tenth release (described here) the RNase P Database is a well-established and widely-used World Wide Web resource.

DESCRIPTION

The Ribonuclease P Database is a compilation of RNase P sequences, sequence alignments, secondary structures, three-dimensional models and accessory information available electronically via the World Wide Web (see below for details on accessing the database). The hypertext format of the database makes access to its various components straightforward. The database contains information on bacterial, archaeal and eukaryal (including organellar) RNase P, including both RNA and protein subunits. The database is updated continuously as additional sequences and structural information becomes available.

The RNase P RNA and protein sequences in the database are available from lists arranged phylogenetically as individual sequences or as alignments in GenBank format. Organism names, accession numbers and citations are linked to the relevant NCBI/Entrez database records. Secondary structures of each RNA are presented in Graphic Interchange Format (GIFs) and can be downloaded either as level 1 Postscript (.ps) or Adobe Acrobat (.pdf) files. Models of the three-dimensional structure of the RNA are provided in Protein Database (PDB) format, Quicktime movies, and still images (GIF or JPEG format). Accessory information, such as reference structures, phylogenetic trees, computer programs and a comprehensive bibliography are also made available as part of the database. A significant new addition to the database is a sequence alignment editor and analysis program, BIOEDIT, written by Tom Hall and available at no charge.

AVAILABILITY

The Ribonuclease P Database is accessible using any World Wide Web browser capable of viewing frames in html (e.g. Netscape Navigator, Microsoft Explorer, versions 3 or greater) at the URL http://www.mbio.ncsu.edu/RNaseP/home.html . The administrator of the Ribonuclease P database (J.W.B.) can be contacted by e-mail at jwbrown{at}mbio.ncsu.edu or by mail at the address given above. Users of the Ribonuclease P Database should cite this publication.

PLEA FOR HELP

Users of the Ribonuclease P database are encouraged to provide corrections, new information, or other materials for inclusion in the database; unpublished information will be held confidential (via username and password protection) at the author's request. Help is especially needed for expansion of the data made available on the eukaryotic RNase P RNAs.

ACKNOWLEDGEMENTS

Research on RNase P in the author's laboratory is supported by NIH grant GM52894 and Isis Pharmaceuticals.

REFERENCES

1. Pace,N.R. and Brown,J.W. (1995) J. Bacteriol., 177, 1919-1928. MEDLINE Abstract

2. Brown,J.W. and Pace,N.R. (1992) Nucleic Acids Res., 20, 1451-1456. MEDLINE Abstract

3. Guerrier-Takada,C., Gardiner,K., Marsh,T., Pace,N. and Altman,S. (1983) Cell, 35, 849-857. MEDLINE Abstract

*Tel: +1 919 515 8803; Fax: +1 919 515 7867; Email: jwbrown@mbio.ncsu.edu

This page is run by Oxford University Press, Great Clarendon Street, Oxford OX2 6DP, as part of the OUP Journals
Comments and feedback: www-admin{at}oup.co.uk
Last modification: 9 Dec 1998
Copyright©Oxford University Press, 1998.
Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 Nucleic Acids ResHome page
S. Cuzic-Feltens, M. H. W. Weber, and R. K. Hartmann
Investigation of catalysis by bacterial RNase P via LNA and other modifications at the scissile phosphodiester
Nucleic Acids Res., September 30, 2009; (2009) gkp775v1.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
J. W. Brown, A. Birmingham, P. E. Griffiths, F. Jossinet, R. Kachouri-Lafond, R. Knight, B. F. Lang, N. Leontis, G. Steger, J. Stombaugh, et al.
The RNA structure alignment ontology
RNA, September 1, 2009; 15(9): 1623 - 1631.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
A. O. Harmanci, G. Sharma, and D. H. Mathews
Stochastic sampling of the RNA structural alignment space
Nucleic Acids Res., July 1, 2009; 37(12): 4063 - 4075.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
D. L. Kolbe and S. R. Eddy
Local RNA structure alignment with incomplete sequence
Bioinformatics, May 15, 2009; 25(10): 1236 - 1243.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
Z. Huang, Y. Wu, J. Robertson, L. Feng, R. L. Malmberg, and L. Cai
Fast and accurate search for non-coding RNA pseudoknot structures in genomes
Bioinformatics, October 15, 2008; 24(20): 2281 - 2287.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
X. Chen, S.-M. He, D. Bu, F. Zhang, Z. Wang, R. Chen, and W. Gao
FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space
Bioinformatics, September 15, 2008; 24(18): 1994 - 2001.
[Abstract] [Full Text] [PDF]

Home page
 Mol Biol EvolHome page
J. L. Knies, K. K. Dang, T. J. Vision, N. G. Hoffman, R. Swanstrom, and C. L. Burch
Compensatory Evolution in RNA Secondary Structures Increases Substitution Rate Variation among Sites
Mol. Biol. Evol., August 1, 2008; 25(8): 1778 - 1787.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
D. K. Pulukkunat and V. Gopalan
Studies on Methanocaldococcus jannaschii RNase P reveal insights into the roles of RNA and protein cofactors in RNase P catalysis
Nucleic Acids Res., July 1, 2008; 36(12): 4172 - 4180.
[Abstract] [Full Text] [PDF]

Home page
 J. Clin. Microbiol.Home page
I. R. Peters, C. R. Helps, L. McAuliffe, H. Neimark, M. R. Lappin, T. J. Gruffydd-Jones, M. J. Day, L. E. Hoelzle, B. Willi, M. Meli, et al.
RNase P RNA Gene (rnpB) Phylogeny of Hemoplasmas and Other Mycoplasma Species
J. Clin. Microbiol., May 1, 2008; 46(5): 1873 - 1877.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
A. O. Harmanci, G. Sharma, and D. H. Mathews
PARTS: Probabilistic Alignment for RNA joinT Secondary structure prediction
Nucleic Acids Res., April 1, 2008; 36(7): 2406 - 2417.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
S. A. Kawamoto, C. G. Sudhahar, C. L. Hatfield, J. Sun, E. J. Behrman, and V. Gopalan
Studies on the mechanism of inhibition of bacterial ribonuclease P by aminoglycoside derivatives
Nucleic Acids Res., February 2, 2008; 36(2): 697 - 704.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
Y. Zhu, D. K. Pulukkunat, and Y. Li
Deciphering RNA structural diversity and systematic phylogeny from microbial metagenomes
Nucleic Acids Res., April 1, 2007; 35(7): 2283 - 2294.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
P. Mandin, F. Repoila, M. Vergassola, T. Geissmann, and P. Cossart
Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets
Nucleic Acids Res., February 16, 2007; 35(3): 962 - 974.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
V. Gopalan
Uniformity amid diversity in RNase P
PNAS, February 13, 2007; 104(7): 2031 - 2032.
[Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
A. Lescoute and E. Westhof
The interaction networks of structured RNAs
Nucleic Acids Res., December 2, 2006; 34(22): 6587 - 6604.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
H.-Y. Tsai, D. K. Pulukkunat, W. K. Woznick, and V. Gopalan
Functional reconstitution and characterization of Pyrococcus furiosus RNase P
PNAS, October 31, 2006; 103(44): 16147 - 16152.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
N. J. BAIRD, N. SRIVIDYA, A. S. KRASILNIKOV, A. MONDRAGON, T. R. SOSNICK, and T. PAN
Structural basis for altering the stability of homologous RNAs from a mesophilic and a thermophilic bacterium.
RNA, April 1, 2006; 12(4): 598 - 606.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
T. Gesell and A. von Haeseler
In silico sequence evolution with site-specific interactions along phylogenetic trees
Bioinformatics, March 15, 2006; 22(6): 716 - 722.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
Y. DING
Statistical and Bayesian approaches to RNA secondary structure prediction.
RNA, March 1, 2006; 12(3): 323 - 331.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
E. BINDEWALD and B. A. SHAPIRO
RNA secondary structure prediction from sequence alignments using a network of k-nearest neighbor classifiers.
RNA, March 1, 2006; 12(3): 342 - 352.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
R. C. Wilson, C. J. Bohlen, M. P. Foster, and C. E. Bell
Structure of Pfu Pop5, an archaeal RNase P protein
PNAS, January 24, 2006; 103(4): 873 - 878.
[Abstract] [Full Text] [PDF]

Home page
 Cold Spring Harb Symp Quant BiolHome page
S.R. EDDY
Computational Analysis of RNAs
Cold Spring Harb Symp Quant Biol, January 1, 2006; 71(0): 117 - 128.
[Abstract] [PDF]

Home page
 Nucleic Acids ResHome page
E. Kikovska, N.-E. Mikkelsen, and L. A. Kirsebom
The naturally trans-acting ribozyme RNase P RNA has leadzyme properties
Nucleic Acids Res., December 6, 2005; 33(21): 6920 - 6930.
[Abstract] [Full Text] [PDF]

Home page
 BioinformaticsHome page
P. Clote, J. Waldispuhl, B. Behzadi, and J.-M. Steyaert
Energy landscape of k-point mutants of an RNA molecule
Bioinformatics, November 15, 2005; 21(22): 4140 - 4147.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
C. Pichon and B. Felden
From The Cover: Small RNA genes expressed from Staphylococcus aureusgenomic and pathogenicity islands with specific expression among pathogenic strains
PNAS, October 4, 2005; 102(40): 14249 - 14254.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
J. REN, B. RASTEGARI, A. CONDON, and H. H. HOOS
HotKnots: Heuristic prediction of RNA secondary structures including pseudoknots
RNA, October 1, 2005; 11(10): 1494 - 1504.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
A. V. Kazantsev, A. A. Krivenko, D. J. Harrington, S. R. Holbrook, P. D. Adams, and N. R. Pace
Crystal structure of a bacterial ribonuclease P RNA
PNAS, September 20, 2005; 102(38): 13392 - 13397.
[Abstract] [Full Text] [PDF]

Home page
 Int. J. Syst. Evol. Microbiol.Home page
C.-J. Rubin, M. Thollesson, L. A. Kirsebom, and B. Herrmann
Phylogenetic relationships and species differentiation of 39 Legionella species by sequence determination of the RNase P RNA gene rnpB
Int J Syst Evol Microbiol, September 1, 2005; 55(5): 2039 - 2049.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
P. Piccinelli, M. A. Rosenblad, and T. Samuelsson
Identification and analysis of ribonuclease P and MRP RNA in a broad range of eukaryotes
Nucleic Acids Res., August 8, 2005; 33(14): 4485 - 4495.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
Y. DING, C. Y. CHAN, and C. E. LAWRENCE
RNA secondary structure prediction by centroids in a Boltzmann weighted ensemble
RNA, August 1, 2005; 11(8): 1157 - 1166.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
R. KACHOURI, V. STRIBINSKIS, Y. ZHU, K. S. RAMOS, E. WESTHOF, and Y. LI
A surprisingly large RNase P RNA in Candida glabrata
RNA, July 1, 2005; 11(7): 1064 - 1072.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
S. M. MARQUEZ, J. K. HARRIS, S. T. KELLEY, J. W. BROWN, S. C. DAWSON, E. C. ROBERTS, and N. R. PACE
Structural implications of novel diversity in eucaryal RNase P RNA
RNA, May 1, 2005; 11(5): 739 - 751.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
S. Washietl, I. L. Hofacker, and P. F. Stadler
From The Cover: Fast and reliable prediction of noncoding RNAs
PNAS, February 15, 2005; 102(7): 2454 - 2459.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
E. Seif, J. Leigh, Y. Liu, I. Roewer, L. Forget, and B. F. Lang
Comparative mitochondrial genomics in zygomycetes: bacteria-like RNase P RNAs, mobile elements and a close source of the group I intron invasion in angiosperms
Nucleic Acids Res., February 2, 2005; 33(2): 734 - 744.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
C. Liu, B. Bai, G. Skogerbo, L. Cai, W. Deng, Y. Zhang, D. Bu, Y. Zhao, and R. Chen
NONCODE: an integrated knowledge database of non-coding RNAs
Nucleic Acids Res., January 1, 2005; 33(suppl_1): D112 - D115.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
Y. LI and S. ALTMAN
In search of RNase P RNA from microbial genomes
RNA, October 20, 2004; 10(10): 1533 - 1540.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
A. Coventry, D. J. Kleitman, and B. Berger
MSARI: Multiple sequence alignments for statistical detection of RNA secondary structure
PNAS, August 17, 2004; 101(33): 12102 - 12107.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
D. H. MATHEWS
Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization
RNA, August 1, 2004; 10(8): 1178 - 1190.
[Abstract] [Full Text] [PDF]

Home page
 Genome ResHome page
J. D. Jaffe, N. Stange-Thomann, C. Smith, D. DeCaprio, S. Fisher, J. Butler, S. Calvo, T. Elkins, M. G. FitzGerald, N. Hafez, et al.
The Complete Genome and Proteome of Mycoplasma mobile
Genome Res., August 1, 2004; 14(8): 1447 - 1461.
[Abstract] [Full Text] [PDF]

Home page
 Int. J. Syst. Evol. Microbiol.Home page
M. K. Butler and J. A. Fuerst
Comparative analysis of ribonuclease P RNA of the planctomycetes
Int J Syst Evol Microbiol, July 1, 2004; 54(4): 1333 - 1344.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
H. Touzet and O. Perriquet
CARNAC: folding families of related RNAs
Nucleic Acids Res., July 1, 2004; 32(suppl_2): W142 - W145.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
G. Pavesi, G. Mauri, M. Stefani, and G. Pesole
RNAProfile: an algorithm for finding conserved secondary structure motifs in unaligned RNA sequences
Nucleic Acids Res., June 15, 2004; 32(10): 3258 - 3269.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
D. H. Mathews, M. D. Disney, J. L. Childs, S. J. Schroeder, M. Zuker, and D. H. Turner
Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure
PNAS, May 11, 2004; 101(19): 7287 - 7292.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
A. BARRERA and T. PAN
Interaction of the Bacillus subtilis RNase P with the 30S ribosomal subunit
RNA, March 1, 2004; 10(3): 482 - 492.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
W. P. Boomershine, C. A. McElroy, H.-Y. Tsai, R. C. Wilson, V. Gopalan, and M. P. Foster
Structure of Mth11/Mth Rpp29, an essential protein subunit of archaeal and eukaryotic RNase P
PNAS, December 23, 2003; 100(26): 15398 - 15403.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
J. L. CHILDS, A. W. POOLE, and D. H. TURNER
Inhibition of Escherichia coli RNase P by oligonucleotide directed misfolding of RNA
RNA, December 1, 2003; 9(12): 1437 - 1445.
[Abstract] [Full Text] [PDF]

Home page
 Int. J. Syst. Evol. Microbiol.Home page
J. Tapp, M. Thollesson, and B. Herrmann
Phylogenetic relationships and genotyping of the genus Streptococcus by sequence determination of the RNase P RNA gene, rnpB
Int J Syst Evol Microbiol, November 1, 2003; 53(6): 1861 - 1871.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
E. R. SEIF, L. FORGET, N. C. MARTIN, and B. F. LANG
Mitochondrial RNase P RNAs in ascomycete fungi: Lineage-specific variations in RNA secondary structure
RNA, September 1, 2003; 9(9): 1073 - 1083.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
B. Knudsen and J. Hein
Pfold: RNA secondary structure prediction using stochastic context-free grammars
Nucleic Acids Res., July 1, 2003; 31(13): 3423 - 3428.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
A. S. KRASILNIKOV and A. MONDRAGON
On the occurrence of the T-loop RNA folding motif in large RNA molecules
RNA, June 1, 2003; 9(6): 640 - 643.
[Abstract] [Full Text] [PDF]

Home page
 RNAHome page
N. H. ZAHLER, E. L. CHRISTIAN, and M. E. HARRIS
Recognition of the 5' leader of pre-tRNA substrates by the active site of ribonuclease P
RNA, June 1, 2003; 9(6): 734 - 745.
[Abstract] [Full Text] [PDF]

Home page
 Microbiol. Mol. Biol. Rev.Home page
C. Condon
RNA Processing and Degradation in Bacillus subtilis
Microbiol. Mol. Biol. Rev., June 1, 2003; 67(2): 157 - 174.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
H. H. Gan, S. Pasquali, and T. Schlick
Exploring the repertoire of RNA secondary motifs using graph theory; implications for RNA design
Nucleic Acids Res., June 1, 2003; 31(11): 2926 - 2943.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
S. Griffiths-Jones, A. Bateman, M. Marshall, A. Khanna, and S. R. Eddy
Rfam: an RNA family database
Nucleic Acids Res., January 1, 2003; 31(1): 439 - 441.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
S.-Y. Le, K. Zhang, and J. V. Maizel Jr
RNA molecules with structure dependent functions are uniquely folded
Nucleic Acids Res., August 15, 2002; 30(16): 3574 - 3582.
[Abstract] [Full Text] [PDF]

Home page
 Genome ResHome page
Q. Bao, Y. Tian, W. Li, Z. Xu, Z. Xuan, S. Hu, W. Dong, J. Yang, Y. Chen, Y. Xue, et al.
A Complete Sequence of the T. tengcongensis Genome
Genome Res., May 1, 2002; 12(5): 689 - 700.
[Abstract] [Full Text] [PDF]

Home page
 J. Biol. Chem.Home page
V. Gopalan, A. Vioque, and S. Altman
RNase P: Variations and Uses
J. Biol. Chem., February 22, 2002; 277(9): 6759 - 6762.
[Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
S. M. Sharkady and J. M. Nolan
Bacterial ribonuclease P holoenzyme crosslinking analysis reveals protein interaction sites on the RNA subunit
Nucleic Acids Res., September 15, 2001; 29(18): 3848 - 3856.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
M. Wagner, C. Fingerhut, H. J. Gross, and A. Schon
The first phytoplasma RNase P RNA provides new insights into the sequence requirements of this ribozyme
Nucleic Acids Res., June 15, 2001; 29(12): 2661 - 2665.
[Abstract] [Full Text] [PDF]

Home page
 Microbiol. Mol. Biol. Rev.Home page
M. Schaechter and The View From Here Group
Escherichia coli and Salmonella 2000: the View From Here
Microbiol. Mol. Biol. Rev., March 1, 2001; 65(1): 119 - 130.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
Y. Ding and C. E. Lawrence
Statistical prediction of single-stranded regions in RNA secondary structure and application to predicting effective antisense target sites and beyond
Nucleic Acids Res., March 1, 2001; 29(5): 1034 - 1046.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
R. D. M. Page
Comparative analysis of secondary structure of insect mitochondrial small subunit ribosomal RNA using maximum weighted matching
Nucleic Acids Res., October 15, 2000; 28(20): 3839 - 3845.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
T. Dandekar, M. Huynen, J. T. Regula, B. Ueberle, C. U. Zimmermann, M. A. Andrade, T. Doerks, L. Sanchez-Pulido, B. Snel, M. Suyama, et al.
Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames
Nucleic Acids Res., September 1, 2000; 28(17): 3278 - 3288.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
J. A. Pannucci, E. S. Haas, T. A. Hall, J. K. Harris, and J. W. Brown
RNase P RNAs from some Archaea are catalytically active
PNAS, July 6, 1999; 96(14): 7803 - 7808.
[Abstract] [Full Text] [PDF]

This Article
Right arrow Abstract Freely available
Right arrow Print PDF (17K) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (155)
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Brown, J. W.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Brown, J. W.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?