Nucleic Acids Research

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Table 1 Coooperative pairs of TFs with PB < 0.0001
	TF1	TF2	PC
1	FKH2	MCM1	1.23E-32
2	MCM1	NDD1	1.47E-31
3	FKH2	NDD1	1.06E-14
4	CIN5	NRG1	3.39E-13
5	NRG1	PHD1	2.19E-06
6	NRG1	YAP6	2.52E-05
7	CIN5	YAP6	5.30E-05
8	HSF1	SKN7	0.000228121
9	ACE2	HSF1	0.000621471
10	MBP1	SWI6	0.001066468
11	HIR1	SWI4	0.001988068
12	CIN5	PHD1	0.008402556
13	SWI4	SWI6	0.0264287
14	PHD1	YAP6	0.026571615
15	PDR1	SMP1	0.033106464
16	NDD1	STB1	0.055871998

table2.html0100644000175300010010000003151207667700101011727 0ustar ownerNone

Table 2 Coooperative pa irs of TFs with PB < 0.01
	TF1	TF2	PC
1	RAP1	RGM1	1.39E-214
2	PDR1	RAP1	2.64E-148
3	MBP1	SWI6	3.94E-134
4	RAP1	SFP1	2.80E-96
5	PDR1	SFP1	8.53E-59
6	PDR1	SFP1	8.53E-59
7	FKH2	MCM1	7.39E-53
8	FKH2	NDD1	3.63E-44
9	MCM1	NDD1	7.75E-44
10	RGM1	SFP1	2.35E-26
11	SFP1	YAP5	2.63E-25
12	RGM1	YAP5	1.61E-22
13	PDR1	RGM1	2.08E-21
14	PDR1	RGM1	2.08E-21
15	MSN4	PDR1	1.03E-19
16	SWI4	SWI6	5.98E-14
17	MSN4	RAP1	6.16E-14
18	NRG1	SOK2	6.52E-14
19	FKH1	NDD1	3.06E-12
20	RAP1	SMP1	5.56E-12
21	RTG1	RTG3	7.48E-12
22	MSS11	REB1	6.27E-11
23	GAL4	MET31	1.59E-10
24	MSN4	RGM1	3.28E-10
25	STB1	SWI6	4.64E-10
26	GAT3	PDR1	5.28E-10
27	MET4	RAP1	8.94E-10
28	ABF1	FHL1	9.56E-10
29	AZF1	GCR1	9.94E-10
30	DOT6	GRF10(Pho2)	1.27E-09
31	CUP9	SOK2	4.85E-09
32	MSN4	SWI5	2.84E-08
33	NDD1	REB1	4.24E-08
34	FKH1	MCM1	7.41E-08
35	MET4	MSN4	9.38E-08
36	CUP9	NRG1	1.15E-07
37	SOK2	YAP6	1.26E-07
38	CUP9	RME1	1.29E-07
39	REB1	SKN7	2.51E-07
40	AZF1	CHA4	4.35E-07
41	MET4	SFP1	4.66E-07
42	ROX1	SOK2	5.68E-07
43	ASH1	SOK2	8.99E-07
44	GAL4	LEU3	1.07E-06
45	FKH2	HSF1	1.97E-06
46	ROX1	YAP1	3.13E-06
47	GAL4	MSN1	4.14E-06
48	RGM1	SWI5	4.75E-06
49	ACE2	FKH1	5.34E-06
50	MSN1	RAP1	6.23E-06
51	ACE2	REB1	7.07E-06
52	PHD1	SOK2	7.80E-06
53	PHD1	SOK2	7.80E-06
54	STB1	SWI4	8.12E-06
55	RLM1	RTG1	1.14E-05
56	MSS11	SMP1	1.71E-05
57	DOT6	MBP1	1.91E-05
58	MBP1	SWI4	2.20E-05
59	FKH2	SMP1	2.63E-05
60	CIN5	PHD1	2.95E-05
61	DIG1	ROX1	3.51E-05
62	CUP9	HAL9	4.01E-05
63	CIN5	SOK2	4.42E-05
64	GAT3	MET4	4.73E-05
65	CIN5	INO4	5.21E-05
66	BAS1	RCS1	6.26E-05
67	CUP9	FHL1	7.76E-05
68	CUP9	PHD1	9.29E-05
69	MCM1	STE12	0.000126372
70	ABF1	REB1	0.000128368
71	CIN5	NRG1	0.000130605
72	MET31	RCS1	0.000144505
73	FKH1	SWI4	0.000147983
74	DIG1	MAC1	0.000212831
75	NRG1	YAP6	0.000216419
76	REB1	SWI4	0.000284848
77	ASH1	YAP6	0.000303038
78	RME1	YAP1	0.000309888
79	CHA4	NDD1	0.000345921
80	MSN1	MSN4	0.000350883
81	ARO80	NRG1	0.000352005
82	RCS1	RME1	0.000357018
83	NRG1	ROX1	0.000369696
84	CHA4	ROX1	0.000378707
85	MET31	MET4	0.000388678
86	GAT3	GRF10(Pho2)	0.000389098
87	RTG3	SUM1	0.000406684
88	CHA4	FZF1	0.000438722
89	DIG1	LEU3	0.000475728
90	MSS11	RAP1	0.000481122
91	FKH1	UGA3	0.000529363
92	MET31	ROX1	0.000533618
93	CIN5	YAP6	0.000540796
94	ASH1	CIN5	0.00055427
95	FKH1	SWI5	0.000565553
96	MET31	MSN1	0.000799031
97	FZF1	HAL9	0.000835313
98	ROX1	YAP6	0.000841813
99	ABF1	GCN4	0.000879699
100	CIN5	CUP9	0.000975534
101	CIN5	DAL81	0.001006411
102	MAL13	SWI5	0.001017236
103	MTH1	SWI5	0.001036647
104	FKH1	MTH1	0.001306425
105	CHA4	MBP1	0.001514977
106	MSN4	YAP5	0.001589954
107	STP2	ZAP1	0.001658659
108	MBP1	STE12	0.00169113
109	AZF1	HAL9	0.001707982
110	MET4	SMP1	0.001829586
111	MTH1	SKN7	0.002237705
112	MSN4	SMP1	0.002420732
113	STE12	SWI4	0.002484139
114	BAS1	MET31	0.002486228
115	MBP1	STB1	0.002558024
116	RIM101	RLM1	0.002756657
117	RAP1	RPH1	0.00280801
118	FKH1	SOK2	0.003116791
119	RLM1	SWI5	0.003364606
120	CBF1	MET4	0.00359734
121	FKH2	STB1	0.004180652
122	DAL81	MET4	0.004645682
123	DOT6	MET31	0.00568544
124	MET4	PDR1	0.006003604
125	CBF1	MET31	0.006471772
126	MET4	SWI4	0.007056857
127	AZF1	ROX1	0.007634241
128	NDD1	YAP6	0.008092513
129	MCM1	SWI5	0.008560617
130	SFL1	SOK2	0.009214891
131	MSN1	RGM1	0.009760812
132	DIG1	MET31	0.010239903
133	FZF1	YAP1	0.010584885
134	NRG1	PHD1	0.01067435
135	BAS1	HIR1	0.010880637
136	DIG1	SWI5	0.011483341
137	CIN5	HAP3	0.011511645
138	CIN5	SKN7	0.011947625
139	PHD1	ROX1	0.012076516
140	PHD1	ROX1	0.012076516
141	CUP9	DAL81	0.012196805
142	REB1	ROX1	0.012255155
143	NRG1	SFL1	0.012535267
144	REB1	SWI5	0.012916154
145	CUP9	FZF1	0.013203701
146	DAL81	SWI4	0.013393461
147	GAT3	MSN4	0.014342297
148	FKH2	MET4	0.016481463
149	CAD1	ZAP1	0.016555041
150	MBP1	MET4	0.016734552
151	SMP1	SOK2	0.016983077
152	STE12	SWI6	0.017389087
153	CIN5	FZF1	0.017681548
154	CIN5	HIR2	0.017933917
155	MSN4	ZAP1	0.018310637
156	MSN1	YAP5	0.018363868
157	CIN5	MBP1	0.018755882
158	ACE2	SWI5	0.019368331
159	RME1	SMP1	0.02107216
160	FZF1	IME4	0.021912731
161	MET31	RAP1	0.023070875
162	ACE2	NDD1	0.025243834
163	CIN5	ROX1	0.02563457
164	FZF1	RME1	0.028591327
165	ABF1	MCM1	0.029553643
166	ABF1	GCR2	0.031430702
167	CIN5	HSF1	0.031832617
168	ABF1	MET4	0.03262888
169	GAL4	SWI5	0.033726464
170	ACE2	SKN7	0.035355758
171	DAL81	HSF1	0.036617877
172	GAT3	MSN1	0.036829891
173	ASH1	CUP9	0.037051473
174	FKH1	FKH2	0.039757947
155	MSN4	ZAP1	0.018310637
156	MSN1	YAP5	0.018363868
157	CIN5	MBP1	0.018755882
158	ACE2	SWI5	0.019368331
159	RME1	SMP1	0.02107216
160	FZF1	IME4	0.021912731
161	MET31	RAP1	0.023070875
162	ACE2	NDD1	0.025243834
163	CIN5	ROX1	0.02563457
164	FZF1	RME1	0.028591327
165	ABF1	MCM1	0.029553643
166	ABF1	GCR2	0.031430702
167	CIN5	HSF1	0.031832617
168	ABF1	MET4	0.03262888
169	GAL4	SWI5	0.033726464
170	ACE2	SKN7	0.035355758
171	DAL81	HSF1	0.036617877
172	GAT3	MSN1	0.036829891
173	ASH1	CUP9	0.037051473
174	FKH1	FKH2	0.039757947
175	FKH1	MBP1	0.042458574
176	FKH2	SWI6	0.043531287
177	SUM1	SWI6	0.046232845
178	ABF1	SIP4	0.046316162
179	ARG80	ARG81	0.047353595
180	GAL4	ZAP1	0.047596353
181	RLM1	SUM1	0.049807552
182	FZF1	HAP3	0.050329476
183	BAS1	MAC1	0.055773021

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