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Nucleic Acids Research, 1985, Vol. 13, No. 14 5341-5352
© 1985


Articles

A new synthesis of certain 7-(ß-D-ribofuranosyl) and 7-{2-deoxy-ß-D-ribofuranosyl) derivatives of 3-deazaguanine via the sodium salt glycosylation procedure

Pranab K. Gupta, Roland K. Robins and Ganapathi R. Revankar*

Cancer Research Center, Department of Cheniistiy, Brigham Young University Provo, UT 84602, USA

*To whom correspondence should be addressed

Received April 3, 1985. Revised June 19, 1985. Accepted June 19, 1985.

A facile synthesis of 7-ß-D-ribofuranosyl-3-deazaguanine (1) and certain 8-substituted derivatives of 1 via the sodium salt glycosylation method has been developed. Glycosylation of the sodium salt of methyl 2-chloro(or methylthio)-4(5)-cyanomethylimidazole-5(4)-carboxylate (5 and 13b) with 2,3,5-tri-O-benzoyl-D-ribofuranosyl bromide (6) gave exclusively methyl 2-chloro(or methylthio)-4-cyanomethyl-1-(2,3,5-tri-O-benzoyl-ß-D-ribofuranosyl)imidazole-5-carboxylate (7 and 14a), respectively. Ammonolysis of 7 and 14a provided 6-amino-2-chloro(or methylthio)-3-ß-D-ribofuranosylimidazo-[4,5-c]pyridin-4(5H)-one (11 and 17), which on subsequent dehalogenation (or dethiation) gave 1. Similarly, reaction of the sodium salt of 5 and 13b with 1-chloro-2-deoxy-3,5-di-O-p-toluoyl-{alpha}-D-erythro-pentofuranose (8), and ammonolysis of the glycosylated imidazole precursors (9 and 16) gave 6-amino-2-chloro(or methylthio)-3-(2-deoxy-ß-D-erythro-pentofuranosyl)imidazo[4,5-c]-pyridin-4(5H)-one (10a and 15), respectively. Dehalogenation of 10a or dethiation of 15 gave 2'-deoxy-7-ß-D-ribofuranosyl-3-deazaguanine (10b). This procedure provided a direct method of obtaining 10b without the contaminating 9-glycosyl isomer 4.


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Synthesis of 2'-O-methyl-RNAs incorporating a 3-deazaguanine, and UV melting and computational studies on its hybridization properties
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