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Nucleic Acids Research, 1987, Vol. 15, No. 16 6563-6573
© 1987

Articles

Identification by a random sequencing strategy of the fowlpoxvirus DNA polymerase gene, its nucleotide sequence and comparison with other viral DNA polymerases

Matthew M. Binns, Laura Stenzler1, Fiona M. Tomley, Joan Campbell and Michael E.G. Boursnell

Institute for Animal Disease Research, Houghton Laboratory Houghton, Huntingdon, Cambridgeshire PE17 2DA, UK 1New York State College of Veterinary Medicine, Cornell University Ithaca, NY, USA

Received June 17, 1987. Revised July 31, 1987. Accepted July 31, 1987.

The nucleotide sequence of the DNA polymerase gene of the avipoxvirus fowlpox is presented and the predicted amino acid sequence compared with that of the orthopoxvirus vaccinia. The results have brought to light an error in the vaccinia sequence which has resulted in the ommission of 44 amino acids from the carboxy-terminus of the vaccinia DNA polymerase. There has been extensive conservation of amino acids throughout the enzymes, and regions identified as being present in DNA polymerases from a vide range of viruses are again present here. The method used to identify the fowlpoxvirus gene could have applications towards defining genomic organisations in other viral systems.


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