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Nucleic Acids Research, 1989, Vol. 17, No. 20 8207-8219
© 1989


CHEMISTRY

Phosphoroselenoate oligodeoxynucleotides: synthesis, physico-chemical characterization, anti-sense inhibitory properties and anti-HIV activity

K. Mori, C. Boiziau1, C. Cazenave1, M. Matsukura, C. Subasinghe, J.S. Cohen, S. Broder, J.J. Toulmé and C.A. Stein*

Medicine Branch and Clinical Onocology Program, National Cancer Institute, NIH Bethesda, MD 20892, USA 1Laboratoire de Biophysique, INSERM U201, CNRS UA 481, Muséum National d'Histoire Naturelle 43 rue Cuvier F-75231 Paris Cedex 5, France

*To whom correspondence should be addressed

Received June 2, 1989. Revised September 15, 1989. Accepted September 15, 1989.

Oligodeoxynucleotides with a phosphorus atom in which one of the non-bridging oxygen atoms is substituted by selenium were prepared and investigated with respect to their antisense properties. A general synthesis of phosphoroselenoate analogs of oligonucleotides is described using potassium selenocyanate as the selenium donor. The compounds, characterized by 31P NMR, were shown to decompose to phosphate with a half-life of ca. 30 days. Melting temperatures of duplexes between poly(rA) or poly(rI) with oligo(dT) and oligo(dC), respectively, indicate diminished hybridization capability of phosphoroselenoate oligomers relative to both the unmodified phosphodiester oligomers and the phosphorothioate congeners. A phosphoroselenoate 17-mer is a sequence specific inhibitor of rabbit ß-globin synthesis in wheat germ extract and in injected Xenopus oocytes. In contrast phosphoroselenoate analogs are potent non-sequence specific inhibitors in rabbit reticulocyte lysate. In vitro HIV assays were carried out on a phosphoroselenoate sequence and compared with a phosphorothioate analogue that has previously been shown to exhibit anti-HIV activity (Matsukura et al., Proc. Natl. Acad. Sci. (1987) 84, 7706–7710). The phosphoroselenoate was somewhat less active, and was much more toxic to the cells.


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C. Stein and Y. Cheng
Antisense oligonucleotides as therapeutic agents--is the bullet really magical?
Science, August 20, 1993; 261(5124): 1004 - 1012.
[Abstract] [PDF]



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