Nucleic Acids Research, 1990, Vol. 18, No. 20 6097-6100
© 1990
MOLECULAR BIOLOGY |
Sequence logos: a new way to display consensus sequences
National Cancer Institute, Frederick Cancer Research and Development Center, Laboratory of Mathematical Biology PO Box B, Frederick, MD 21701, USA
*To whom correspondence should be addressed
Received May 30, 1990. Revised September 12, 1990. Accepted September 12, 1990.
A graphical method is presented for displaying the patterns in a set of aligned sequences. The characters representing the sequence are stacked on top of each other for each position in the aligned sequences. The height of each letter is made proportional to Its frequency, and the letters are sorted so the most common one is on top. The height of the entire stack is then adjusted to signify the information content of the sequences at that position. From these ‘sequence logos’, one can determine not only the consensus sequence but also the relative frequency of bases and the information content (measured In bits) at every position in a site or sequence. The logo displays both significant residues and subtle sequence patterns.
CiteULike 
Connotea 
Del.icio.us What's this?
This article has been cited by other articles:
|
|
 |
|
  S. Bryson, J.-P. Julien, R. C. Hynes, and E. F. Pai Crystallographic Definition of the Epitope Promiscuity of the Broadly Neutralizing Anti-Human Immunodeficiency Virus Type 1 Antibody 2F5: Vaccine Design Implications J. Virol., November 15, 2009; 83(22): 11862 - 11875. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 E. de Wit, S. E.V. Linsen, E. Cuppen, and E. Berezikov Repertoire and evolution of miRNA genes in four divergent nematode species Genome Res., November 1, 2009; 19(11): 2064 - 2074. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 M. Defrance and J. van Helden info-gibbs: a motif discovery algorithm that directly optimizes information content during sampling Bioinformatics, October 15, 2009; 25(20): 2715 - 2722. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 R. Schwarz, P. N. Seibel, S. Rahmann, C. Schoen, M. Huenerberg, C. Muller-Reible, T. Dandekar, R. Karchin, J. Schultz, and T. Muller Detecting species-site dependencies in large multiple sequence alignments Nucleic Acids Res., October 1, 2009; 37(18): 5959 - 5968. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. A. Sharov and M. S.H. Ko Exhaustive Search for Over-represented DNA Sequence Motifs with CisFinder DNA Res, October 1, 2009; 16(5): 261 - 273. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. D. Freeman, R. L. Warren, J. R. Webb, B. H. Nelson, and R. A. Holt Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing Genome Res., October 1, 2009; 19(10): 1817 - 1824. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 F. Bringaud, M. Berriman, and C. Hertz-Fowler Trypanosomatid Genomes Contain Several Subfamilies of ingi-Related Retroposons Eukaryot. Cell, October 1, 2009; 8(10): 1532 - 1542. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. Sethuraman, A. Majer, N. C. Friedrich, D. R. Edgell, and G. Hausner Genes within Genes: Multiple LAGLIDADG Homing Endonucleases Target the Ribosomal Protein S3 Gene Encoded within an rnl Group I Intron of Ophiostoma and Related Taxa Mol. Biol. Evol., October 1, 2009; 26(10): 2299 - 2315. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P.-Y. Liao, Y. S. Choi, and K. H. Lee FSscan: a mechanism-based program to identify +1 ribosomal frameshift hotspots Nucleic Acids Res., September 26, 2009; (2009) gkp796v1. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. Ernst, S. L. Sazinsky, S. Hui, B. Currell, M. Dharsee, S. Seshagiri, G. D. Bader, and S. S. Sidhu Rapid Evolution of Functional Complexity in a Domain Family Sci. Signal., September 8, 2009; 2(87): ra50 - ra50. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. A. F. T. van Hijum, M. H. Medema, and O. P. Kuipers Mechanisms and Evolution of Control Logic in Prokaryotic Transcriptional Regulation Microbiol. Mol. Biol. Rev., September 1, 2009; 73(3): 481 - 509. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. Mrazek Finding sequence motifs in prokaryotic genomes--a brief practical guide for a microbiologist Brief Bioinform, September 1, 2009; 10(5): 525 - 536. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 B. Wang, Z. Xiao, and E. C. Ren Redefining the p53 response element PNAS, August 25, 2009; 106(34): 14373 - 14378. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. J. Schultheiss, W. Busch, J. U. Lohmann, O. Kohlbacher, and G. Ratsch KIRMES: kernel-based identification of regulatory modules in euchromatic sequences Bioinformatics, August 15, 2009; 25(16): 2126 - 2133. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A.-K. Berglund, E. Spanning, H. Biverstahl, G. Maddalo, C. Tellgren-Roth, L. Maler, and E. Glaser Dual Targeting to Mitochondria and Chloroplasts: Characterization of Thr-tRNA Synthetase Targeting Peptide Mol Plant, July 27, 2009; (2009) ssp048v1. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
C. Schillinger, P. Boisguerin, and G. Krause Domain Interaction Footprint: a multi-classification approach to predict domain-peptide interactions Bioinformatics, July 1, 2009; 25(13): 1632 - 1639. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
J. Zhang, E. Li, and G. J. Olsen Protein-coding gene promoters in Methanocaldococcus (Methanococcus) jannaschii Nucleic Acids Res., June 1, 2009; 37(11): 3588 - 3601. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 K. Y. Chang and E. R. Unanue Prediction of HLA-DQ8 {beta} cell peptidome using a computational program and its relationship to autoreactive T cells Int. Immunol., June 1, 2009; 21(6): 705 - 713. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H. Zhang, O. Lund, and M. Nielsen The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding Bioinformatics, May 15, 2009; 25(10): 1293 - 1299. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 A. Garbino, R. J. van Oort, S. S. Dixit, A. P. Landstrom, M. J. Ackerman, and X. H. T. Wehrens Molecular evolution of the junctophilin gene family Physiol Genomics, May 13, 2009; 37(3): 175 - 186. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
P. Zhou and Z. Shang 2D molecular graphics: a flattened world of chemistry and biology Brief Bioinform, May 1, 2009; 10(3): 247 - 258. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H. A. Ebhardt, H. H. Tsang, D. C. Dai, Y. Liu, B. Bostan, and R. P. Fahlman Meta-analysis of small RNA-sequencing errors reveals ubiquitous post-transcriptional RNA modifications Nucleic Acids Res., May 1, 2009; 37(8): 2461 - 2470. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. Banos, R. Perez-Redondo, B. Koekman, and P. Liras Glycerol Utilization Gene Cluster in Streptomyces clavuligerus Appl. Envir. Microbiol., May 1, 2009; 75(9): 2991 - 2995. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 J. Pena-Sanchez, S. Poggio, U. Flores-Perez, A. Osorio, C. Domenzain, G. Dreyfus, and L. Camarena Identification of the binding site of the {sigma}54 hetero-oligomeric FleQ/FleT activator in the flagellar promoters of Rhodobacter sphaeroides Microbiology, May 1, 2009; 155(5): 1669 - 1679. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 N. Yachie, R. Saito, J. Sugahara, M. Tomita, and Y. Ishihama In Silico Analysis of Phosphoproteome Data Suggests a Rich-get-richer Process of Phosphosite Accumulation over Evolution Mol. Cell. Proteomics, May 1, 2009; 8(5): 1061 - 1071. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y. Fu, O. Bannach, H. Chen, J.-H. Teune, A. Schmitz, G. Steger, L. Xiong, and W. B. Barbazuk Alternative splicing of anciently exonized 5S rRNA regulates plant transcription factor TFIIIA Genome Res., May 1, 2009; 19(5): 913 - 921. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
L. R. Dresang, D. T. Vereide, and B. Sugden Identifying Sites Bound by Epstein-Barr Virus Nuclear Antigen 1 (EBNA1) in the Human Genome: Defining a Position-Weighted Matrix To Predict Sites Bound by EBNA1 in Viral Genomes J. Virol., April 1, 2009; 83(7): 2930 - 2940. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. M. Lehman, A. M. Kropinski, A. J. Castle, and A. M. Svircev Complete Genome of the Broad-Host-Range Erwinia amylovora Phage {Phi}Ea21-4 and Its Relationship to Salmonella Phage Felix O1 Appl. Envir. Microbiol., April 1, 2009; 75(7): 2139 - 2147. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 P. Zeman and P. Jahn An entropy-optimized multilocus approach for characterizing the strains of Anaplasma phagocytophilum infecting horses in the Czech Republic J. Med. Microbiol., April 1, 2009; 58(4): 423 - 429. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
F. J. M. Mojica, C. Diez-Villasenor, J. Garcia-Martinez, and C. Almendros Short motif sequences determine the targets of the prokaryotic CRISPR defence system Microbiology, March 1, 2009; 155(3): 733 - 740. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 V. J. Munster, C. Baas, P. Lexmond, T. M. Bestebroer, J. Guldemeester, W. E. P. Beyer, E. de Wit, M. Schutten, G. F. Rimmelzwaan, A. D. M. E. Osterhaus, et al. Practical Considerations for High-Throughput Influenza A Virus Surveillance Studies of Wild Birds by Use of Molecular Diagnostic Tests J. Clin. Microbiol., March 1, 2009; 47(3): 666 - 673. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. C. Sleumer, M. Bilenky, A. He, G. Robertson, N. Thiessen, and S. J. M. Jones Caenorhabditis elegans cisRED: a catalogue of conserved genomic elements Nucleic Acids Res., March 1, 2009; 37(4): 1323 - 1334. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. M. Moses and R. Durbin Inferring Selection on Amino Acid Preference in Protein Domains Mol. Biol. Evol., March 1, 2009; 26(3): 527 - 536. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 T. Tanaka, K. O. Koyanagi, and T. Itoh Highly Diversified Molecular Evolution of Downstream Transcription Start Sites in Rice and Arabidopsis Plant Physiology, March 1, 2009; 149(3): 1316 - 1324. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Nishida, M. C. Frith, and K. Nakai Pseudocounts for transcription factor binding sites Nucleic Acids Res., February 1, 2009; 37(3): 939 - 944. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 X. Rao, A. I. C. A. Fontaine Costa, D. van Baarle, and C. Kesmir A Comparative Study of HLA Binding Affinity and Ligand Diversity: Implications for Generating Immunodominant CD8+ T Cell Responses J. Immunol., February 1, 2009; 182(3): 1526 - 1532. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Zhang, W. Su, and J. Yang ARCS-Motif: discovering correlated motifs from unaligned biological sequences Bioinformatics, January 15, 2009; 25(2): 183 - 189. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T. Whitington, A. C. Perkins, and T. L. Bailey High-throughput chromatin information enables accurate tissue-specific prediction of transcription factor binding sites Nucleic Acids Res., January 1, 2009; 37(1): 14 - 25. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 P.G. Bagos, K.D. Tsirigos, S.K. Plessas, T.D. Liakopoulos, and S.J. Hamodrakas Prediction of signal peptides in archaea Protein Eng. Des. Sel., January 1, 2009; 22(1): 27 - 35. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 T. B. Wells, G. Zhang, Z. Harley, and H. Vaziri Genetic Hypervariability in Two Distinct Deuterostome Telomerase Reverse Transcriptase Genes and their Early Embryonic Functions Mol. Biol. Cell, January 1, 2009; 20(1): 464 - 480. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 C. S. B. Viegas, D. C. Simes, V. Laize, M. K. Williamson, P. A. Price, and M. L. Cancela Gla-rich Protein (GRP), A New Vitamin K-dependent Protein Identified from Sturgeon Cartilage and Highly Conserved in Vertebrates J. Biol. Chem., December 26, 2008; 283(52): 36655 - 36664. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Gabor, K. Hailesellasse Sene, H. Smidt, W. M. de Vos, and J. van der Oost Divergent roles of CprK paralogues from Desulfitobacterium hafniense in activating gene expression Microbiology, December 1, 2008; 154(12): 3686 - 3696. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
E. Li, C. I. Reich, and G. J. Olsen A whole-genome approach to identifying protein binding sites: promoters in Methanocaldococcus (Methanococcus) jannaschii Nucleic Acids Res., December 1, 2008; 36(22): 6948 - 6958. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
L. N. Hutchins, S. M. Murphy, P. Singh, and J. H. Graber Position-dependent motif characterization using non-negative matrix factorization Bioinformatics, December 1, 2008; 24(23): 2684 - 2690. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. S. Linheiro and C. M. Bergman Testing the palindromic target site model for DNA transposon insertion using the Drosophila melanogaster P-element Nucleic Acids Res., November 1, 2008; 36(19): 6199 - 6208. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. L. Warren, J. D. Freeman, R. C. Levesque, D. E. Smailus, S. Flibotte, and R. A. Holt Transcription of foreign DNA in Escherichia coli Genome Res., November 1, 2008; 18(11): 1798 - 1805. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Katzman, C. Barrett, G. Thiltgen, R. Karchin, and K. Karplus PREDICT-2ND: a tool for generalized protein local structure prediction Bioinformatics, November 1, 2008; 24(21): 2453 - 2459. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 S. M. Li, J. Wakefield, and S. Self A transdimensional Bayesian model for pattern recognition in DNA sequences Biostat., October 1, 2008; 9(4): 668 - 685. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H. Escobar, D. K. Crockett, E. Reyes-Vargas, A. Baena, A. L. Rockwood, P. E. Jensen, and J. C. Delgado Large Scale Mass Spectrometric Profiling of Peptides Eluted from HLA Molecules Reveals N-Terminal-Extended Peptide Motifs J. Immunol., October 1, 2008; 181(7): 4874 - 4882. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
W. Li, B. Yang, S. Liang, Y. Wang, C. Whiteley, Y. Cao, and X. Wang BLogo: a tool for visualization of bias in biological sequences Bioinformatics, October 1, 2008; 24(19): 2254 - 2255. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 M. Savic, T. Ilic-Tomic, R. Macmaster, B. Vasiljevic, and G. L. Conn Critical Residues for Cofactor Binding and Catalytic Activity in the Aminoglycoside Resistance Methyltransferase Sgm J. Bacteriol., September 1, 2008; 190(17): 5855 - 5861. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. R. Gruber, C. Kilgus, A. Mosig, I. L. Hofacker, W. Hennig, and P. F. Stadler Arthropod 7SK RNA Mol. Biol. Evol., September 1, 2008; 25(9): 1923 - 1930. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
F. Santos-Beneit, A. Rodriguez-Garcia, E. Franco-Dominguez, and J. F. Martin Phosphate-dependent regulation of the low- and high-affinity transport systems in the model actinomycete Streptomyces coelicolor Microbiology, August 1, 2008; 154(8): 2356 - 2370. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. Larsen, S. A. F. T. van Hijum, J. Martinussen, O. P. Kuipers, and J. Kok Transcriptome Analysis of the Lactococcus lactis ArgR and AhrC Regulons Appl. Envir. Microbiol., August 1, 2008; 74(15): 4768 - 4771. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. G. Remacle, S. A. Shiryaev, E.-S. Oh, P. Cieplak, A. Srinivasan, G. Wei, R. C. Liddington, B. I. Ratnikov, A. Parent, R. Desjardins, et al. Substrate Cleavage Analysis of Furin and Related Proprotein Convertases: A COMPARATIVE STUDY J. Biol. Chem., July 25, 2008; 283(30): 20897 - 20906. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. R. Coffin and N. O. Reich Modulation of Escherichia coli DNA Methyltransferase Activity by Biologically Derived GATC-flanking Sequences J. Biol. Chem., July 18, 2008; 283(29): 20106 - 20116. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. El Qaidi and J. Plumbridge Switching Control of Expression of ptsG from the Mlc Regulon to the NagC Regulon J. Bacteriol., July 1, 2008; 190(13): 4677 - 4686. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
T.-H. Chang, J.-T. Horng, and H.-D. Huang RNALogo: a new approach to display structural RNA alignment Nucleic Acids Res., July 1, 2008; 36(suppl_2): W91 - W96. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
I. G. Lyakhov, A. Krishnamachari, and T. D. Schneider Discovery of novel tumor suppressor p53 response elements using information theory Nucleic Acids Res., June 1, 2008; 36(11): 3828 - 3833. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
B.-K. Cho, E. M. Knight, C. L. Barrett, and B. O. Palsson Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts Genome Res., June 1, 2008; 18(6): 900 - 910. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. E. Gabriel, F. Miyagi, A. Gaballa, and J. D. Helmann Regulation of the Bacillus subtilis yciC Gene and Insights into the DNA-Binding Specificity of the Zinc-Sensing Metalloregulator Zur J. Bacteriol., May 15, 2008; 190(10): 3482 - 3488. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y. Elbaz, T. Salomon, and S. Schuldiner Identification of a Glycine Motif Required for Packing in EmrE, a Multidrug Transporter from Escherichia coli J. Biol. Chem., May 2, 2008; 283(18): 12276 - 12283. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
M. B. Noyes, X. Meng, A. Wakabayashi, S. Sinha, M. H. Brodsky, and S. A. Wolfe A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system Nucleic Acids Res., May 1, 2008; 36(8): 2547 - 2560. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 R. L. Houtz, R. Magnani, N. R. Nayak, and L. M. A. Dirk Co- and post-translational modifications in Rubisco: unanswered questions J. Exp. Bot., May 1, 2008; 59(7): 1635 - 1645. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. Graindorge, O. Le Tonqueze, R. Thuret, N. Pollet, H. B. Osborne, and Y. Audic Identification of CUG-BP1/EDEN-BP target mRNAs in Xenopus tropicalis Nucleic Acids Res., April 1, 2008; 36(6): 1861 - 1870. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
K. Gao, A. Masuda, T. Matsuura, and K. Ohno Human branch point consensus sequence is yUnAy Nucleic Acids Res., April 1, 2008; 36(7): 2257 - 2267. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
H. Huang, L. Li, C. Wu, D. Schibli, K. Colwill, S. Ma, C. Li, P. Roy, K. Ho, Z. Songyang, et al. Defining the Specificity Space of the Human Src Homology 2 Domain Mol. Cell. Proteomics, April 1, 2008; 7(4): 768 - 784. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
R. D. Morin, G. Aksay, E. Dolgosheina, H. A. Ebhardt, V. Magrini, E. R. Mardis, S. C. Sahinalp, and P. J. Unrau Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa Genome Res., April 1, 2008; 18(4): 571 - 584. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
A. Sola-Landa, A. Rodriguez-Garcia, A. K. Apel, and J. F. Martin Target genes and structure of the direct repeats in the DNA-binding sequences of the response regulator PhoP in Streptomyces coelicolor Nucleic Acids Res., March 27, 2008; 36(4): 1358 - 1368. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
D. B. Veprintsev and A. R. Fersht Algorithm for prediction of tumour suppressor p53 affinity for binding sites in DNA Nucleic Acids Res., March 1, 2008; 36(5): 1589 - 1598. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
S. Kundu-Michalik, M.-A. Bisotti, E. Lipsius, A. Bauche, A. Kruppa, T. Klokow, G. Kammler, and J. Kruppa Nucleolar Binding Sequences of the Ribosomal Protein S6e Family Reside in Evolutionary Highly Conserved Peptide Clusters Mol. Biol. Evol., March 1, 2008; 25(3): 580 - 590. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Y. Liu, H. Gao, T. T. Marstrand, A. Strom, E. Valen, A. Sandelin, J.-A. Gustafsson, and K. Dahlman-Wright The genome landscape of ER{alpha}- and ER{beta}-binding DNA regions PNAS, February 19, 2008; 105(7): 2604 - 2609. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
B. R. Belitsky and A. L. Sonenshein Genetic and Biochemical Analysis of CodY-Binding Sites in Bacillus subtilis J. Bacteriol., February 15, 2008; 190(4): 1224 - 1236. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
I. E. Sanchez, M. Dellarole, K. Gaston, and G. de Prat Gay Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics Nucleic Acids Res., February 11, 2008; 36(3): 756 - 769. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 Y.-L. Tzeng, C. M. Kahler, X. Zhang, and D. S. Stephens MisR/MisS Two-Component Regulon in Neisseria meningitidis Infect. Immun., February 1, 2008; 76(2): 704 - 716. [Abstract] [Full Text] [PDF]
|
|
|
|
|
|
Q. Kaas, J.-C. Westermann, R. Halai, C. K. L. Wang, and D. J. Craik ConoServer, a database for conopeptide sequences and structures Bioinformatics, February 1, 2008; 24(3): 445 - 446. [Abstract] [Full Text] [PDF]
|
|
|
|
 |
|
 F. Murray, N. Darzentas, A. Hadzidimitriou, G. Tobin, M. Boudjogra, C. Scielzo, N. Laoutaris, K. Karlsson, F. Baran-Marzsak, A. Tsaftaris, et al. Stereotyped patterns of somatic hypermutation in subsets of patients with chronic lymphocytic leukemia: implications for the role of antigen selection in leukemogenesis Blood, February 1, 2008; 111(3): 1524 - 1533. [Abstract] [Full Text] [PDF]
|
|