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Nucleic Acids Research, 1975, Vol. 2, No. 5 613-624
© 1975


Articles

Enzymatic synthesis of oligonucleotides of defined sequence. Addition of short blocks of nucleotide residues to oligonucleotide primers*

Shirley Gillam, Kimberley Waterman and Michael Smith**

Department of Biochemistry, Faculty of Medicine, University of British Columbia Vancouver, British Columbia V6T 1W5, Canada

Received January 10, 1975.

Polynucleotide phosphorylase from Escherichia coli can be used to catalyse the addition of short tracts of deoxyadenylate residues to the 3'-termini of deoxyribooligonucleotides of the type pdAn-dN (where dN = dC, dT or dG) using dADP as donor. Similarly, the enzyme can also be used to catalyse the addition of short tracts of adenylate residues to the 3'-termini of ribooligonucleotides of the type An-N (where N = C, U or G) using ADP as donor. In the riboo-ligonucleotide series, phosphorolytic cleavage of the primer oligonucleotides is significant and results in the concommitant production of oligoadenylates lacking the N residue. Oligomers of the same length, with and without the residue N, were readily separated by thermal elution from cellulose-pdT9 columns. This latter procedure therefore provides a simple method for purification of the oligoadenylates containing an internal base substitution and it also provides a convenient assay for oligonucleotide phosphorolysis.


*This research was supported by the Medical Research Council of Canada

**Medical Research Associate of the Medical Research Council of Canada


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