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Nucleic Acids Research, 1992, Vol. 20, No. 9 2361-2366
© 1992


MOLECULAR BIOLOGY

Identification of exon sequences and an exon binding protein involved in alternative RNA splicing of calcitonin/CGRP

Gilbert J. Cote, David T. Stolow1, Sara Peleg2, Susan M. Berget1 and Robert F. Gagel2

Department of Medicine, Baylor College of Medicine and Veterans Affairs Medical Center Houston, TX 77030 1Verna and Marrs McLean Department of Biochemistry, Baylor College of Medicine Houston, TX 77030 2Department of Medical Specialties, M.D. Anderson Cancer Center Houston, TX 77030, USA

Received November 20, 1991. Revised March 23, 1992. Accepted March 23, 1992.

Transcripts derived from the 6 exon CALC I gene are differentially processed in a tissue-specific fashion to include or exclude a calcitonin-specific exon 4. All cell types which transcribe a second calcitonin/CGRP gene, CALC II, exclude exon 4. Substitution of the first 30 nucleotides of CALC I exon 4 with analogous CALC II sequence was sufficient to prevent recognition of exon 4 in in vitro or in vivo RNA splicing systems. UV crosslinking detected a ~66 kDa RNA-binding protein in HeLa nuclear extract which interacted with CALC I proximal exon sequence, but not CALC II or mutant sequences. UV crosslinking of this protein was inhibited by addition of nuclear extract from a cell type which normally causes exclusion of exon 4. These results identify an important regulatory element within exon 4 and support a model in which calcitonin production requires protein interaction with this sequence to facilitate exon recognition.


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