Skip Navigation

This Article
Right arrow Full Text Freely available
Right arrow Print PDF (364K) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (135)
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Sprinzl, M
Right arrow Articles by Steinberg, S
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Sprinzl, M
Right arrow Articles by Steinberg, S
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© 1996 Oxford University Press 68-72

Footnote

Compilation of tRNA sequences and sequences of tRNA genes

Compilation of tRNA sequences and sequences of tRNA genes Mathias Sprinzl* , Clemens Steegborn , Frank Hübel 1 and Sergey Steinberg +

Laboratorium für Biochemie, Universität Bayreuth, 95440 Bayreuth , Germany and 1 Institut für Landwirtschaftliche Botanik, Universität Bonn, Meckenheimer Allee 176, 53115 Bonn , Germany

Received September 5, 1995 ; Accepted September 19, 1995

INTRODUCTION

The 1995 compilation contains 2700 sequences of tRNAs and tRNA genes. The last edition which appeared two years ago ( 1 ) was supplemented by 694 new sequences. The sequences of tRNA mutants and of tRNAs originating from transformed or differentiated cells were not considered.

The tRNAs included in the compilation are listed in Table 1 . Each tRNA or tRNA gene is specified by the (abbreviated) name of the organism from which it was isolated and a four digit code: the first three digits identify the organism, the last digit . . . [Full Text of this Article]

Presentation of sequences

Numbering and alignment of the variable region

Alignment of animal mitochondrial tRNAs

ACKNOWLEDGEMENTS

REFERENCES


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
Plant CellHome page
E. Delannoy, M. Le Ret, E. Faivre-Nitschke, G. M. Estavillo, M. Bergdoll, N. L. Taylor, B. J. Pogson, I. Small, P. Imbault, and J. M. Gualberto
Arabidopsis tRNA Adenosine Deaminase Arginine Edits the Wobble Nucleotide of Chloroplast tRNAArg(ACG) and Is Essential for Efficient Chloroplast Translation
PLANT CELL, July 1, 2009; 21(7): 2058 - 2071.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
L. W. Rider, M. B. Ottosen, S. G. Gattis, and B. A. Palfey
Mechanism of Dihydrouridine Synthase 2 from Yeast and the Importance of Modifications for Efficient tRNA Reduction
J. Biol. Chem., April 17, 2009; 284(16): 10324 - 10333.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
W. F. Waas, V. de Crecy-Lagard, and P. Schimmel
Discovery of a Gene Family Critical to Wyosine Base Formation in a Subset of Phenylalanine-specific Transfer RNAs
J. Biol. Chem., November 11, 2005; 280(45): 37616 - 37622.
[Abstract] [Full Text] [PDF]


Home page
Mol. Biol. CellHome page
A. Crausaz Esseiva, L. Marechal-Drouard, A. Cosset, and A. Schneider
The T-Stem Determines the Cytosolic or Mitochondrial Localization of Trypanosomal tRNAsMet
Mol. Biol. Cell, June 1, 2004; 15(6): 2750 - 2757.
[Abstract] [Full Text] [PDF]


Home page
Genome ResHome page
A. O. Urrutia and L. D. Hurst
The Signature of Selection Mediated by Expression on Human Genes
Genome Res., October 1, 2003; 13(10): 2260 - 2264.
[Abstract] [Full Text] [PDF]


Home page
MicrobiologyHome page
S. M. Kinghorn, C. P. O'Byrne, I. R. Booth, and I. Stansfield
Physiological analysis of the role of truB in Escherichia coli: a role for tRNA modification in extreme temperature resistance
Microbiology, November 1, 2002; 148(11): 3511 - 3520.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
K. Rudi, T. Fossheim, and K. S. Jakobsen
Nested Evolution of a tRNALeu(UAA) Group I Intron by both Horizontal Intron Transfer and Recombination of the Entire tRNA Locus
J. Bacteriol., February 1, 2002; 184(3): 666 - 671.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
Y. Zebarjadian, T. King, M. J. Fournier, L. Clarke, and J. Carbon
Point Mutations in Yeast CBF5 Can Abolish In Vivo Pseudouridylation of rRNA
Mol. Cell. Biol., November 1, 1999; 19(11): 7461 - 7472.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
K.-Y. Chang, G. Varani, S. Bhattacharya, H. Choi, and W. H. McClain
Correlation of deformability at a tRNA recognition site and aminoacylation specificity
PNAS, October 12, 1999; 96(21): 11764 - 11769.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
D. T. Newton, C. Creuzenet, and D. Mangroo
Formylation Is Not Essential for Initiation of Protein Synthesis in All Eubacteria
J. Biol. Chem., August 6, 1999; 274(32): 22143 - 22146.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. Biol.Home page
O. Calvo, R. Cuesta, J. Anderson, N. Gutierrez, M. T. Garcia-Barrio, A. G. Hinnebusch, and M. Tamame
GCD14p, a Repressor of GCN4 Translation, Cooperates with Gcd10p and Lhp1p in the Maturation of Initiator Methionyl-tRNA in Saccharomyces cerevisiae
Mol. Cell. Biol., June 1, 1999; 19(6): 4167 - 4181.
[Abstract] [Full Text] [PDF]


Home page
J. Bacteriol.Home page
K. Rudi and K. S. Jakobsen
Complex Evolutionary Patterns of tRNAUAALeu Group I Introns in Cyanobacterial Radiation
J. Bacteriol., June 1, 1999; 181(11): 3445 - 3451.
[Abstract] [Full Text]


Home page
ScienceHome page
M. E. Saks, J. R. Sampson, and J. Abelson
Evolution of a Transfer RNA Gene Through a Point Mutation in the Anticodon
Science, March 13, 1998; 279(5357): 1665 - 1670.
[Abstract] [Full Text]


Home page
Mol. Cell. Biol.Home page
H. J. Drabkin, M. Estrella, and U. L. Rajbhandary
Initiator-Elongator Discrimination in Vertebrate tRNAs for Protein Synthesis
Mol. Cell. Biol., March 1, 1998; 18(3): 1459 - 1466.
[Abstract] [Full Text]


Home page
J. Biol. Chem.Home page
S. Matsuyama, T. Ueda, P. F. Crain, J. A. McCloskey, and K. Watanabe
A Novel Wobble Rule Found in Starfish Mitochondria. PRESENCE OF 7-METHYLGUANOSINE AT THE ANTICODON WOBBLE POSITION EXPANDS DECODING CAPABILITY OF tRNA
J. Biol. Chem., February 6, 1998; 273(6): 3363 - 3368.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
F. Lecointe, G. Simos, A. Sauer, E. C. Hurt, Y. Motorin, and H. Grosjean
Characterization of Yeast Protein Deg1 as Pseudouridine Synthase (Pus3) Catalyzing the Formation of Psi 38 and Psi 39 in tRNA Anticodon Loop
J. Biol. Chem., January 16, 1998; 273(3): 1316 - 1323.
[Abstract] [Full Text] [PDF]


Home page
J. Biol. Chem.Home page
M. Watanabe, M. Matsuo, S. Tanaka, H. Akimoto, S. Asahi, S. Nishimura, J. R. Katze, T. Hashizume, P. F. Crain, J. A. McCloskey, et al.
Biosynthesis of Archaeosine, a Novel Derivative of 7-Deazaguanosine Specific to Archaeal tRNA, Proceeds via a Pathway Involving Base Replacement on the tRNA Polynucleotide Chain
J. Biol. Chem., August 8, 1997; 272(32): 20146 - 20151.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
J. R. Powell and E. N. Moriyama
Evolution of codon usage bias in Drosophila
PNAS, July 22, 1997; 94(15): 7784 - 7790.
[Abstract] [Full Text] [PDF]


Home page
Proc. Natl. Acad. Sci. USAHome page
S. N. Rodin and S. Ohno
Four primordial modes of tRNA-synthetase recognition, determined by the (G,C) operational code
PNAS, May 13, 1997; 94(10): 5183 - 5188.
[Abstract] [Full Text] [PDF]