Skip Navigation

This Article
Right arrow Full Text Freely available
Right arrow Print PDF (105K) Freely available
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (36)
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Henikoff, J. G.
Right arrow Articles by Henikoff, S.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Henikoff, J. G.
Right arrow Articles by Henikoff, S.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, Vol 25, Issue 1 222-225, Copyright © 1997 by Oxford University Press

ARTICLES

Recent enhancements to the Blocks Database servers

JG Henikoff, S Pietrokovski and S Henikoff
Fred Hutchinson Cancer Research Center, 1124 Columbia Street, Seattle, WA 98104, USA.

The Blocks Database contains multiple alignments of conserved regions in protein families which can be searched by e-mail (blocks@blocks.fhcrc.org) and World Wide Web (http://blocks.fhcrc.org/ ) servers to classify protein and nucleotide sequences. Recent enhancements to the servers include: (i) improved calculation of position-specific scoring matrices from blocks; (ii) availability of the Prints protein fingerprint database for searching in Blocks format; (iii) a representative sequence biased towards the Blocks of a protein family; (iv) a tree constructed from the Blocks of a protein family; (v) links to related World Wide Web pages for a family; and (vi) the new Local Alignment of Multiple Alignments (LAMA) method to search a block against a database of blocks.
Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 Nucleic Acids ResHome page
T. L. Bailey, N. Williams, C. Misleh, and W. W. Li
MEME: discovering and analyzing DNA and protein sequence motifs.
Nucleic Acids Res., July 1, 2006; 34(Web Server issue): W369 - W373.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
I. Zucchi, C. Montagna, L. Susani, R. Montesano, M. Affer, S. Zanotti, E. Redolfi, P. Vezzoni, and R. Dulbecco
Genetic dissection of dome formation in a mammary cell line: Identification of two genes with opposing action
PNAS, November 23, 1999; 96(24): 13766 - 13770.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
J. Schultz, F. Milpetz, P. Bork, and C. P. Ponting
SMART, a simple modular architecture research tool: Identification of signaling domains
PNAS, May 26, 1998; 95(11): 5857 - 5864.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
C. G. Nevill-Manning, T. D. Wu, and D. L. Brutlag
Highly specific protein sequence motifs for genome analysis
PNAS, May 26, 1998; 95(11): 5865 - 5871.
[Abstract] [Full Text] [PDF]

Home page
 GeneticsHome page
S. Henikoff and L. Comai
A DNA Methyltransferase Homolog With a Chromodomain Exists in Multiple Polymorphic Forms in Arabidopsis
Genetics, May 1, 1998; 149(1): 307 - 318.
[Abstract] [Full Text] [PDF]

Home page
 Proc. Natl. Acad. Sci. USAHome page
I. Zucchi, C. Montagna, L. Susani, P. Vezzoni, and R. Dulbecco
The rat gene homologous to the human gene 9-27 is involved in the development of the mammary gland
PNAS, February 3, 1998; 95(3): 1079 - 1084.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.