Nucleic Acids Research, Vol 26, Issue 1 382-386, Copyright © 1998 by Oxford University Press
N Blom, A Kreegipuu and S Brunak
PhosphoBase is a database of experimentally verified phosphorylation sites.
Version 1.0 contains 156 entries and 398 experimentally determined
phosphorylation sites. Entries are compiled and revised from the literature
and from major protein sequence databases such as SwissProt and PIR. The
entries provide information about the phosphoprotein and the exact position
of its phosphorylation sites. Furthermore, part of the entries contain
information about kinetic data obtained from enzyme assays on specific
peptides. To illustrate the use of data extracted from PhosphoBase we
present a sequence logo displaying the overall conservation of positions
around serines phosphorylated by protein kinase A (PKA). PhosphoBase is
available on the WWW at http://www.cbs.dtu.dk/databases/PhosphoBase/
ARTICLES
PhosphoBase: a database of phosphorylation sites
Center for Biological Sequence Analysis, Department of Chemistry, Building 207, The Technical University of Denmark, DK-2800 Lyngby, Denmark. nikob@cbs.dtu.dk
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