Nucleic Acids Research, Vol 27, Issue 1 318-322, Copyright © 1999 by Oxford University Press
T Heinemeyer, X Chen, H Karas, AE Kel, OV Kel, I Liebich, T Meinhardt, I Reuter, F Schacherer and E Wingender
TRANSFAC is a database on transcription factors, their genomic binding
sites and DNA-binding profiles. In addition to being updated and extended
by new features, it has been complemented now by a series of additional
database modules. Among them, modules which provide data about signal
transduction pathways (TRANSPATH) or about cell types/organs/developmental
stages (CYTOMER) are available as well as an updated version of the
previously described COMPEL database. The databases are available on the
WWW at http://transfac.gbf.de/
ARTICLES
Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms
Gesellschaft fur Biotechnologische Forschung mbH, Mascheroder Weg 1, D- 38124 Braunschweig, Germany.
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N. Ghosh, J. F. Piskurich, G. Wright, K. Hassani, J. P.-Y. Ting, and K. L. Wright A Novel Element and a TEF-2-like Element Activate the Major Histocompatibility Complex Class II Transactivator in B-lymphocytes J. Biol. Chem., November 5, 1999; 274(45): 32342 - 32350. [Abstract] [Full Text] [PDF]
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T. G. Wolfsberg, A. E. Gabrielian, M. J. Campbell, R. J. Cho, J. L. Spouge, and D. Landsman Candidate Regulatory Sequence Elements for Cell Cycle-Dependent Transcription in Saccharomyces cerevisiae Genome Res., August 1, 1999; 9(8): 775 - 792. [Abstract] [Full Text]
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X.-L. Zheng, S. Matsubara, C. Diao, M. D. Hollenberg, and N. C. W. Wong Activation of Apolipoprotein AI Gene Expression by Protein Kinase A and Kinase C through Transcription Factor, Sp1 J. Biol. Chem., October 6, 2000; 275(41): 31747 - 31754. [Abstract] [Full Text] [PDF]
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S.-J. Shih, C. Allan, S. Grehan, E. Tse, C. Moran, and J. M. Taylor Duplicated Downstream Enhancers Control Expression of the Human Apolipoprotein E Gene in Macrophages and Adipose Tissue J. Biol. Chem., October 6, 2000; 275(41): 31567 - 31572. [Abstract] [Full Text] [PDF]
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H. Esterbauer, H. Oberkofler, F. Krempler, A. D. Strosberg, and W. Patsch The Uncoupling Protein-3 Gene Is Transcribed from Tissue-specific Promoters in Humans but Not in Rodents J. Biol. Chem., November 10, 2000; 275(46): 36394 - 36399. [Abstract] [Full Text] [PDF]
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M. R. Dusing, E. A. Florence, and D. A. Wiginton PDX-1 Is Required for Activation in Vivo from a Duodenum-specific Enhancer J. Biol. Chem., April 20, 2001; 276(17): 14434 - 14442. [Abstract] [Full Text] [PDF]
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L. B. Cavelier, Y. Qiu, J. K. Bielicki, V. Afzal, J.-F. Cheng, and E. M. Rubin Regulation and Activity of the Human ABCA1 Gene in Transgenic Mice J. Biol. Chem., May 18, 2001; 276(21): 18046 - 18051. [Abstract] [Full Text] [PDF]
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J. F. Kurland, R. Kodym, M. D. Story, K. B. Spurgers, T. J. McDonnell, and R. E. Meyn NF-kappa B1 (p50) Homodimers Contribute to Transcription of the bcl-2 Oncogene J. Biol. Chem., November 21, 2001; 276(48): 45380 - 45386. [Abstract] [Full Text] [PDF]
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Z. Borok, X. Li, V. F. J. Fernandes, B. Zhou, D. K. Ann, and E. D. Crandall Differential Regulation of Rat Aquaporin-5 Promoter/Enhancer Activities in Lung and Salivary Epithelial Cells J. Biol. Chem., August 18, 2000; 275(34): 26507 - 26514. [Abstract] [Full Text] [PDF]
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A. Bernal and D. A. Kimbrell Drosophila Thor participates in host immune defense and connects a translational regulator with innate immunity PNAS, May 23, 2000; 97(11): 6019 - 6024. [Abstract] [Full Text] [PDF]
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Y. Suzuki, T. Tsunoda, J. Sese, H. Taira, J. Mizushima-Sugano, H. Hata, T. Ota, T. Isogai, T. Tanaka, Y. Nakamura, et al. Identification and Characterization of the Potential Promoter Regions of 1031 Kinds of Human Genes Genome Res., May 1, 2001; 11(5): 677 - 684. [Abstract] [Full Text]
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