Skip Navigation

This Article
Right arrow Full Text Freely available
Right arrow Print PDF (116K) Freely available
Right arrow Supplementary Data
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in ISI Web of Science
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Search for citing articles in:
ISI Web of Science (86)
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Wuyts, J.
Right arrow Articles by De Wachter, R.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Wuyts, J.
Right arrow Articles by De Wachter, R.
Social Bookmarking
 Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, 2001, Vol. 29, No. 1 175-177
© 2001 Oxford University Press

The European Large Subunit Ribosomal RNA Database

Jan Wuyts1, Peter De Rijk1, Yves Van de Peer1,2, Tina Winkelmans1 and Rupert De Wachter1,*

1Departement Biochemie, Universiteit Antwerpen (UIA), Universiteitsplein 1, B-2610 Antwerpen, Belgium and 2Fakultät Biologie, Universität Konstanz, D-78457 Konstanz, Germany

The European Large Subunit Ribosomal RNA Database compiles all complete or nearly complete large subunit ribosomal RNA sequences available from public sequence databases. These are provided in aligned format and the secondary structure, as derived by comparative sequence analysis, is included. Additional information about the sequences such as literature references and taxonomic information is also included. The database is available from our WWW server at http://rrna.uia.ac.be/lsu/.

* To whom correspondence should be addressed. Tel: +32 3 820 23 19; Fax: +32 3 820 22 48; Email: dwachter{at}uia.ua.ac.be


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
Nucleic Acids ResHome page
E. Pruesse, C. Quast, K. Knittel, B. M. Fuchs, W. Ludwig, J. Peplies, and F. O. Glockner
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
Nucleic Acids Res., December 18, 2007; 35(21): 7188 - 7196.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
F. Razga, J. Koca, A. Mokdad, and J. Sponer
Elastic properties of ribosomal RNA building blocks: molecular dynamics of the GTPase-associated center rRNA
Nucleic Acids Res., June 9, 2007; 35(12): 4007 - 4017.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
A. Mokdad, M. V. Krasovska, J. Sponer, and N. B. Leontis
Structural and evolutionary classification of G/U wobble basepairs in the ribosome
Nucleic Acids Res., March 6, 2006; 34(5): 1326 - 1341.
[Abstract] [Full Text] [PDF]


Home page
Mol Biol EvolHome page
V. Gowri-Shankar and M. Rattray
On the Correlation Between Composition and Site-Specific Evolutionary Rate: Implications for Phylogenetic Inference
Mol. Biol. Evol., February 1, 2006; 23(2): 352 - 364.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
S. SMIT, M. YARUS, and R. KNIGHT
Natural selection is not required to explain universal compositional patterns in rRNA secondary structure categories
RNA, January 1, 2006; 12(1): 1 - 14.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
P. SCHATTNER, S. BARBERAN-SOLER, and T. M. LOWE
A computational screen for mammalian pseudouridylation guide H/ACA RNAs
RNA, January 1, 2006; 12(1): 15 - 25.
[Abstract] [Full Text] [PDF]


Home page
Mol Biol EvolHome page
N. Arisue, M. Hasegawa, and T. Hashimoto
Root of the Eukaryota Tree as Inferred from Combined Maximum Likelihood Analyses of Multiple Molecular Sequence Data
Mol. Biol. Evol., March 1, 2005; 22(3): 409 - 420.
[Abstract] [Full Text] [PDF]


Home page
Mol Biol EvolHome page
A. D. Smith, T. W. H. Lui, and E. R. M. Tillier
Empirical Models for Substitution in Ribosomal RNA
Mol. Biol. Evol., March 1, 2004; 21(3): 419 - 427.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
W. Ludwig, O. Strunk, R. Westram, L. Richter, H. Meier, Yadhukumar, A. Buchner, T. Lai, S. Steppi, G. Jobb, et al.
ARB: a software environment for sequence data
Nucleic Acids Res., February 25, 2004; 32(4): 1363 - 1371.
[Abstract] [Full Text] [PDF]


Home page
Int. J. Syst. Evol. Microbiol.Home page
S. Brosnan, W. Shin, K. M. Kjer, and R. E. Triemer
Phylogeny of the photosynthetic euglenophytes inferred from the nuclear SSU and partial LSU rDNA
Int J Syst Evol Microbiol, July 1, 2003; 53(4): 1175 - 1186.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
B. Knudsen and J. Hein
Pfold: RNA secondary structure prediction using stochastic context-free grammars
Nucleic Acids Res., July 1, 2003; 31(13): 3423 - 3428.
[Abstract] [Full Text] [PDF]


Home page
Mol Biol EvolHome page
L. M. Marquez, D. J. Miller, J. B. MacKenzie, and M. J. H. van Oppen
Pseudogenes Contribute to the Extreme Diversity of Nuclear Ribosomal DNA in the Hard Coral Acropora
Mol. Biol. Evol., July 1, 2003; 20(7): 1077 - 1086.
[Abstract] [Full Text] [PDF]


Home page
RNAHome page
A. S. KRASILNIKOV and A. MONDRAGON
On the occurrence of the T-loop RNA folding motif in large RNA molecules
RNA, June 1, 2003; 9(6): 640 - 643.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
S. Griffiths-Jones, A. Bateman, M. Marshall, A. Khanna, and S. R. Eddy
Rfam: an RNA family database
Nucleic Acids Res., January 1, 2003; 31(1): 439 - 441.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
O. Lecompte, R. Ripp, J.-C. Thierry, D. Moras, and O. Poch
Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale
Nucleic Acids Res., December 15, 2002; 30(24): 5382 - 5390.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
P. Schattner
Searching for RNA genes using base-composition statistics
Nucleic Acids Res., May 1, 2002; 30(9): 2076 - 2082.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
J. Wuyts, Y. Van de Peer, and R. De Wachter
Distribution of substitution rates and location of insertion sites in the tertiary structure of ribosomal RNA
Nucleic Acids Res., December 15, 2001; 29(24): 5017 - 5028.
[Abstract] [Full Text] [PDF]



Disclaimer:
Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.