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Nucleic Acids Research, 2002, Vol. 30, No. 1 152-157
© 2002 Oxford University Press

HOWDY: an integrated database system for human genome research

Mika Hirakawa*

Bioinformatics Division, Advanced Databases Department, Japan Science and Technology Corporation (JST), 5-3 Yonban-cho, Chiyoda-ku, Tokyo 102-0081, Japan

HOWDY is an integrated database system for accessing and analyzing human genomic information (http://www-alis.tokyo.jst.go.jp/HOWDY/). HOWDY stores information about relationships between genetic objects and the data extracted from a number of databases. HOWDY consists of an Internet accessible user interface that allows thorough searching of the human genomic databases using the gene symbols and their aliases. It also permits flexible editing of the sequence data. The database can be searched using simple words and the search can be restricted to a specific cytogenetic location. Linear maps displaying markers and genes on contig sequences are available, from which an object can be chosen. Any search starting point identifies all the information matching the query. HOWDY provides a convenient search environment of human genomic data for scientists unsure which database is most appropriate for their search.

* Tel: +81 774 38 3270; Fax: +81 774 38 3269; Email:mika{at}tokyo.jst.go.jp


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