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Nucleic Acids Research, 2003, Vol. 31, No. 13 3645-3650
© 2003 Oxford University Press

The web server of IBM's Bioinformatics and Pattern Discovery group

Tien Huynh, Isidore Rigoutsos*, Laxmi Parida, Daniel Platt and Tetsuo Shibuya1

Bioinformatics and Pattern Discovery Group, IBM TJ Watson Research Center, PO BOX 218, Yorktown Heights, NY 10598, USA 1 Exploratory Technology, IBM Tokyo Research Laboratory, 1623-14, Shimotsuruma, Yamato-shi, Kanagawa 242-8502, Japan

*To whom correspondence should be addressed. Tel: +1 9149451384; Fax: +1 914 945 4104; Email: rigoutso{at}us.ibm.com

We herein present and discuss the services and content which are available on the web server of IBM's Bioinformatics and Pattern Discovery group. The server is operational around the clock and provides access to a variety of methods that have been published by the group's members and collaborators. The available tools correspond to applications ranging from the discovery of patterns in streams of events and the computation of multiple sequence alignments, to the discovery of genes in nucleic acid sequences and the interactive annotation of amino acid sequences. Additionally, annotations for more than 70 archaeal, bacterial, eukaryotic and viral genomes are available on-line and can be searched interactively. The tools and code bundles can be accessed beginning at http://cbcsrv.watson.ibm.com/Tspd.html whereas the genomics annotations are available at http://cbcsrv.watson.ibm.com/Annotations/.


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T. Huynh and I. Rigoutsos
The web server of IBM's Bioinformatics and Pattern Discovery group: 2004 update
Nucleic Acids Res., July 1, 2004; 32(suppl_2): W10 - W15.
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