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Nucleic Acids Research 2004 32(15):4665-4675; doi:10.1093/nar/gkh777
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Published online 27 August 2004

Nucleic Acids Research, Vol. 32 No. 15 © Oxford University Press 2004; all rights reserved

Enzymatic switching for efficient and accurate translesion DNA replication

Scott D. McCulloch, Robert J. Kokoska, Olga Chilkova1, Carrie M. Welch2, Erik Johansson1, Peter M. J. Burgers2 and Thomas A. Kunkel*

Laboratory of Molecular Genetics and Laboratory of Structural Biology, National Institute of Environmental Health Sciences, NIH, DHHS, Research Triangle Park, NC 27709, USA, 1 Department of Medical Biochemistry and Biophysics, Umeå University, SE-901 87 Umeå, Sweden and 2 Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St Louis, MO 63110, USA

* To whom correspondence should be addressed. Tel: +1 919 541 2644; Fax: +1 919 541 7613; Email: kunkel{at}niehs.nih.gov

Received June 3, 2004; Revised and Accepted July 30, 2004

When cyclobutane pyrimidine dimers stall DNA replication by DNA polymerase (Pol) {delta} or {epsilon}, a switch occurs to allow translesion synthesis by DNA polymerase {eta}, followed by another switch that allows normal replication to resume. In the present study, we investigate these switches using Saccharomyces cerevisiae Pol {delta}, Pol {epsilon} and Pol {eta} and a series of matched and mismatched primer templates that mimic each incorporation needed to completely bypass a cissyn thymine–thymine (TT) dimer. We report a complementary pattern of substrate use indicating that enzymatic switching involving localized translesion synthesis by Pol {eta} and mismatch excision and polymerization by a major replicative polymerase can account for the efficient and accurate dimer bypass known to suppress sunlight-induced mutagenesis and skin cancer.


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