Published online 11 February 2004
Nucleic Acids Research, 2004, Vol. 32, No. 3 977-988
© 2004 Oxford University Press
The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1
David A. Rasko,
Jacques Ravel,
Ole Andreas Økstad1,2,
Erlendur Helgason1,
Regina Z. Cer,
Lingxia Jiang,
Kelly A. Shores,
Derrick E. Fouts,
Nicolas J. Tourasse1,
Samuel V. Angiuoli,
James Kolonay,
William C. Nelson,
Anne-Brit Kolstø1,2,
Claire M. Fraser and
Timothy D. Read*
The Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA,
1 The Biotechnology Centre of Oslo, University of Oslo, PB 1125, Oslo N-0316, Norway and
2 School of Pharmacy, University of Oslo, PB 1068, Oslo N-0316, Norway
*To whom correspondence should be addressed. Tel: +1 301 984 4973; Fax: +1 301 984 4979; Email: ReadT{at}NMRC.NAVY.MIL
Present addresses:
Timothy D. Read, Biological Defense Research Directorate, Naval Medical Research Center, 503 Robert Grant Avenue, Silver Spring, MD 20910 USA and Henry M. Jackson Foundation for the Advancement of Military Medicine, 1401 Rockville Pike, Rockville, MD 20851 USA+AE017194 and AE017195
We sequenced the complete genome of Bacillus cereus ATCC 10987, a non-lethal dairy isolate in the same genetic subgroup as Bacillus anthracis. Comparison of the chromosomes demonstrated that B.cereus ATCC 10987 was more similar to B.anthracis Ames than B.cereus ATCC 14579, while containing a number of unique metabolic capabilities such as urease and xylose utilization and lacking the ability to utilize nitrate and nitrite. Additionally, genetic mechanisms for variation of capsule carbohydrate and flagella surface structures were identified. Bacillus cereus ATCC 10987 contains a single large plasmid (pBc10987, of
208 kb, that is similar in gene content and organization to B.anthracis pXO1 but is lacking the pathogenicity-associated island containing the anthrax lethal and edema toxin complex genes. The chromosomal similarity of B.cereus ATCC 10987 to B.anthracis Ames, as well as the fact that it contains a large pXO1-like plasmid, may make it a possible model for studying B.anthracis plasmid biology and regulatory cross-talk.

CiteULike
Connotea
Del.icio.us What's this?
This article has been cited by other articles:

|
 |

|
 |
 
L. Bouillaut, S. Perchat, S. Arold, S. Zorrilla, L. Slamti, C. Henry, M. Gohar, N. Declerck, and D. Lereclus
Molecular basis for group-specific activation of the virulence regulator PlcR by PapR heptapeptides
Nucleic Acids Res.,
June 1, 2008;
36(11):
3791 - 3801.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
L. Liang, X. He, G. Liu, and H. Tan
The role of a purine-specific nucleoside hydrolase in spore germination of Bacillus thuringiensis
Microbiology,
May 1, 2008;
154(5):
1333 - 1340.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Mols and T. Abee
Role of Ureolytic Activity in Bacillus cereus Nitrogen Metabolism and Acid Survival
Appl. Envir. Microbiol.,
April 15, 2008;
74(8):
2370 - 2378.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
X. Hu, W. Fan, B. Han, H. Liu, D. Zheng, Q. Li, W. Dong, J. Yan, M. Gao, C. Berry, et al.
Complete Genome Sequence of the Mosquitocidal Bacterium Bacillus sphaericus C3-41 and Comparison with Those of Closely Related Bacillus Species
J. Bacteriol.,
April 15, 2008;
190(8):
2892 - 2902.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
C. K. Cote, J. Bozue, K. L. Moody, T. L. DiMezzo, C. E. Chapman, and S. L. Welkos
Analysis of a novel spore antigen in Bacillus anthracis that contributes to spore opsonization
Microbiology,
February 1, 2008;
154(2):
619 - 632.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Klevan, N. J. Tourasse, F. B. Stabell, A.-B. Kolsto, and O. A. Okstad
Exploring the evolution of the Bacillus cereus group repeat element bcr1 by comparative genome analysis of closely related strains
Microbiology,
November 1, 2007;
153(11):
3894 - 3908.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
E. Tinsley and S. A. Khan
A Bacillus anthracis-Based In Vitro System Supports Replication of Plasmid pXO2 as Well as Rolling-Circle-Replicating Plasmids
Appl. Envir. Microbiol.,
August 1, 2007;
73(15):
5005 - 5010.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
T. Noren, T. Akerlund, M. Wullt, L. G. Burman, and M. Unemo
Mutations in fusA Associated with Posttherapy Fusidic Acid Resistance in Clostridium difficile
Antimicrob. Agents Chemother.,
May 1, 2007;
51(5):
1840 - 1843.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
G. C. Kedar, V. Brown-Driver, D. R. Reyes, M. T. Hilgers, M. A. Stidham, K. J. Shaw, J. Finn, and R. J. Haselbeck
Evaluation of the metS and murB Loci for Antibiotic Discovery Using Targeted Antisense RNA Expression Analysis in Bacillus anthracis
Antimicrob. Agents Chemother.,
May 1, 2007;
51(5):
1708 - 1718.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Fricker, U. Messelhausser, U. Busch, S. Scherer, and M. Ehling-Schulz
Diagnostic Real-Time PCR Assays for the Detection of Emetic Bacillus cereus Strains in Foods and Recent Food-Borne Outbreaks
Appl. Envir. Microbiol.,
March 15, 2007;
73(6):
1892 - 1898.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. R. Parks and J. E. Peters
Transposon Tn7 Is Widespread in Diverse Bacteria and Forms Genomic Islands
J. Bacteriol.,
March 1, 2007;
189(5):
2170 - 2173.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
J. G. E. Wijman, P. P. L. A. de Leeuw, R. Moezelaar, M. H. Zwietering, and T. Abee
Air-Liquid Interface Biofilms of Bacillus cereus: Formation, Sporulation, and Dispersion
Appl. Envir. Microbiol.,
March 1, 2007;
73(5):
1481 - 1488.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. A. Rasko, M. J. Rosovitz, O. A. Okstad, D. E. Fouts, L. Jiang, R. Z. Cer, A.-B. Kolsto, S. R. Gill, and J. Ravel
Complete Sequence Analysis of Novel Plasmids from Emetic and Periodontal Bacillus cereus Isolates Reveals a Common Evolutionary History among the B. cereus-Group Plasmids, Including Bacillus anthracis pXO1
J. Bacteriol.,
January 1, 2007;
189(1):
52 - 64.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. de Been, C. Francke, R. Moezelaar, T. Abee, and R. J. Siezen
Comparative analysis of two-component signal transduction systems of Bacillus cereus, Bacillus thuringiensis and Bacillus anthracis.
Microbiology,
October 1, 2006;
152(Pt 10):
3035 - 3048.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
B. Choudhury, C. Leoff, E. Saile, P. Wilkins, C. P. Quinn, E. L. Kannenberg, and R. W. Carlson
The Structure of the Major Cell Wall Polysaccharide of Bacillus anthracis Is Species-specific
J. Biol. Chem.,
September 22, 2006;
281(38):
27932 - 27941.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
H. M. W. den Besten, M. Mataragas, R. Moezelaar, T. Abee, and M. H. Zwietering
Quantification of the Effects of Salt Stress and Physiological State on Thermotolerance of Bacillus cereus ATCC 10987 and ATCC 14579
Appl. Envir. Microbiol.,
September 1, 2006;
72(9):
5884 - 5894.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. R. Klee, M. Ozel, B. Appel, C. Boesch, H. Ellerbrok, D. Jacob, G. Holland, F. H. Leendertz, G. Pauli, R. Grunow, et al.
Characterization of Bacillus anthracis-Like Bacteria Isolated from Wild Great Apes from Cote d'Ivoire and Cameroon.
J. Bacteriol.,
August 1, 2006;
188(15):
5333 - 5344.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. Xu and J.-C. Cote
Sequence Diversity of the Bacillus thuringiensis and B. cereus Sensu Lato Flagellin (H Antigen) Protein: Comparison with H Serotype Diversity.
Appl. Envir. Microbiol.,
July 1, 2006;
72(7):
4653 - 4662.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
E. Saile and T. M. Koehler
Bacillus anthracis Multiplication, Persistence, and Genetic Exchange in the Rhizosphere of Grass Plants.
Appl. Envir. Microbiol.,
May 1, 2006;
72(5):
3168 - 3174.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
C. S. Han, G. Xie, J. F. Challacombe, M. R. Altherr, S. S. Bhotika, D. Bruce, C. S. Campbell, M. L. Campbell, J. Chen, O. Chertkov, et al.
Pathogenomic Sequence Analysis of Bacillus cereus and Bacillus thuringiensis Isolates Closely Related to Bacillus anthracis
J. Bacteriol.,
May 1, 2006;
188(9):
3382 - 3390.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. E. Fouts, D. A. Rasko, R. Z. Cer, L. Jiang, N. B. Fedorova, A. Shvartsbeyn, J. J. Vamathevan, L. Tallon, R. Althoff, T. S. Arbogast, et al.
Sequencing Bacillus anthracis Typing Phages Gamma and Cherry Reveals a Common Ancestry
J. Bacteriol.,
May 1, 2006;
188(9):
3402 - 3408.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
E. Tinsley and S. A. Khan
A Novel FtsZ-Like Protein Is Involved in Replication of the Anthrax Toxin-Encoding pXO1 Plasmid in Bacillus anthracis.
J. Bacteriol.,
April 1, 2006;
188(8):
2829 - 2835.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. Daffonchio, N. Raddadi, M. Merabishvili, A. Cherif, L. Carmagnola, L. Brusetti, A. Rizzi, N. Chanishvili, P. Visca, R. Sharp, et al.
Strategy for Identification of Bacillus cereus and Bacillus thuringiensis Strains Closely Related to Bacillus anthracis
Appl. Envir. Microbiol.,
February 1, 2006;
72(2):
1295 - 1301.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. Sorokin, B. Candelon, K. Guilloux, N. Galleron, N. Wackerow-Kouzova, S. D. Ehrlich, D. Bourguet, and V. Sanchis
Multiple-Locus Sequence Typing Analysis of Bacillus cereus and Bacillus thuringiensis Reveals Separate Clustering and a Distinct Population Structure of Psychrotrophic Strains
Appl. Envir. Microbiol.,
February 1, 2006;
72(2):
1569 - 1578.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
L. M. Hornstra, Y. P. de Vries, M. H. J. Wells-Bennik, W. M. de Vos, and T. Abee
Characterization of Germination Receptors of Bacillus cereus ATCC 14579
Appl. Envir. Microbiol.,
January 1, 2006;
72(1):
44 - 53.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. Auger, E. Krin, S. Aymerich, and M. Gohar
Autoinducer 2 Affects Biofilm Formation by Bacillus cereus
Appl. Envir. Microbiol.,
January 1, 2006;
72(1):
937 - 941.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
S. Valjevac, V. Hilaire, O. Lisanti, F. Ramisse, E. Hernandez, J.-D. Cavallo, C. Pourcel, and G. Vergnaud
Comparison of Minisatellite Polymorphisms in the Bacillus cereus Complex: a Simple Assay for Large-Scale Screening and Identification of Strains Most Closely Related to Bacillus anthracis
Appl. Envir. Microbiol.,
November 1, 2005;
71(11):
6613 - 6623.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
B. Gorke, E. Foulquier, and A. Galinier
YvcK of Bacillus subtilis is required for a normal cell shape and for growth on Krebs cycle intermediates and substrates of the pentose phosphate pathway
Microbiology,
November 1, 2005;
151(11):
3777 - 3791.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
J.-i. Sekiguchi, P. Tharavichitkul, T. Miyoshi-Akiyama, V. Chupia, T. Fujino, M. Araake, A. Irie, K. Morita, T. Kuratsuji, and T. Kirikae
Cloning and Characterization of a Novel Trimethoprim-Resistant Dihydrofolate Reductase from a Nosocomial Isolate of Staphylococcus aureus CM.S2 (IMCJ1454)
Antimicrob. Agents Chemother.,
September 1, 2005;
49(9):
3948 - 3951.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
N. J. Tourasse, F. B. Stabell, L. Reiter, and A.-B. Kolsto
Unusual Group II Introns in Bacteria of the Bacillus cereus Group
J. Bacteriol.,
August 1, 2005;
187(15):
5437 - 5451.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. Bailey-Smith, S. J. Todd, T. W. Southworth, J. Proctor, and A. Moir
The ExsA Protein of Bacillus cereus Is Required for Assembly of Coat and Exosporium onto the Spore Surface
J. Bacteriol.,
June 1, 2005;
187(11):
3800 - 3806.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
K. Vetsigian and N. Goldenfeld
From The Cover: Global divergence of microbial genome sequences mediated by propagating fronts
PNAS,
May 17, 2005;
102(20):
7332 - 7337.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
L. M. Hornstra, Y. P. de Vries, W. M. de Vos, T. Abee, and M. H. J. Wells-Bennik
gerR, a Novel ger Operon Involved in L-Alanine- and Inosine-Initiated Germination of Bacillus cereus ATCC 14579
Appl. Envir. Microbiol.,
February 1, 2005;
71(2):
774 - 781.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
L. Slamti and D. Lereclus
Specificity and Polymorphism of the PlcR-PapR Quorum-Sensing System in the Bacillus cereus Group
J. Bacteriol.,
February 1, 2005;
187(3):
1182 - 1187.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
F. G. Priest, M. Barker, L. W. J. Baillie, E. C. Holmes, and M. C. J. Maiden
Population Structure and Evolution of the Bacillus cereus Group
J. Bacteriol.,
December 1, 2004;
186(23):
7959 - 7970.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
O. A. Okstad, N. J. Tourasse, F. B. Stabell, C. K. Sundfaer, W. Egge-Jacobsen, P. A. Risoen, T. D. Read, and A.-B. Kolsto
The bcr1 DNA Repeat Element Is Specific to the Bacillus cereus Group and Exhibits Mobile Element Characteristics
J. Bacteriol.,
November 15, 2004;
186(22):
7714 - 7725.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
Z. I. Budarina, D. V. Nikitin, N. Zenkin, M. Zakharova, E. Semenova, M. G. Shlyapnikov, E. A. Rodikova, S. Masyukova, O. Ogarkov, G. E. Baida, et al.
A new Bacillus cereus DNA-binding protein, HlyIIR, negatively regulates expression of B. cereus haemolysin II
Microbiology,
November 1, 2004;
150(11):
3691 - 3701.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
M. Yoshida, N. Fukuhara, and T. Oikawa
Thermophilic, Reversible {gamma}-Resorcylate Decarboxylase from Rhizobium sp. Strain MTP-10005: Purification, Molecular Characterization, and Expression
J. Bacteriol.,
October 15, 2004;
186(20):
6855 - 6863.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
H. Barth, K. Aktories, M. R. Popoff, and B. G. Stiles
Binary Bacterial Toxins: Biochemistry, Biology, and Applications of Common Clostridium and Bacillus Proteins
Microbiol. Mol. Biol. Rev.,
September 1, 2004;
68(3):
373 - 402.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
W. van Schaik, M. H. Zwietering, W. M. de Vos, and T. Abee
Identification of {sigma}B-Dependent Genes in Bacillus cereus by Proteome and In Vitro Transcription Analysis
J. Bacteriol.,
July 1, 2004;
186(13):
4100 - 4109.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
A. R. Hoffmaster, J. Ravel, D. A. Rasko, G. D. Chapman, M. D. Chute, C. K. Marston, B. K. De, C. T. Sacchi, C. Fitzgerald, L. W. Mayer, et al.
Identification of anthrax toxin genes in a Bacillus cereus associated with an illness resembling inhalation anthrax
PNAS,
June 1, 2004;
101(22):
8449 - 8454.
[Abstract]
[Full Text]
[PDF]
|
 |
|

|
 |

|
 |
 
D. W. Ussery, P. F. Hallin, K. Lagesen, and T. Coenye
Genome Update: rRNAs in sequenced microbial genomes
Microbiology,
May 1, 2004;
150(5):
1113 - 1115.
[Full Text]
[PDF]
|
 |
|