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Nucleic Acids Research, 2004, Vol. 32, Database issue D23-D26
© 2004 Oxford University Press

GenBank: update

Dennis A. Benson, Ilene Karsch-Mizrachi, David J. Lipman, James Ostell and David L. Wheeler*

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA

*To whom correspondence should be addressed. Tel: +1 301 435 5950; Fax: +1 301 480 9241; Email: wheeler{at}ncbi.nlm.nih.gov

GenBank (R) is a comprehensive database that contains publicly available DNA sequences for more than 140 000 named organisms, obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects. Most submissions are made using the BankIt (web) or Sequin program and accession numbers are assigned by GenBank staff upon receipt. Daily data exchange with the EMBL Data Library in the UK and the DNA Data Bank of Japan helps ensure worldwide coverage. GenBank is accessible through NCBI’s retrieval system, Entrez, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP. To access GenBank and its related retrieval and analysis services, go to the NCBI home page at: http://www.ncbi.nlm.nih.gov.


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IMGT/V-QUEST, an integrated software program for immunoglobulin and T cell receptor V-J and V-D-J rearrangement analysis
Nucleic Acids Res., July 1, 2004; 32(suppl_2): W435 - W440.
[Abstract] [Full Text] [PDF]


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J. Clin. Microbiol.Home page
J. B. Patel, R. J. Wallace Jr., B. A. Brown-Elliott, T. Taylor, C. Imperatrice, D. G. B. Leonard, R. W. Wilson, L. Mann, K. C. Jost, and I. Nachamkin
Sequence-Based Identification of Aerobic Actinomycetes
J. Clin. Microbiol., June 1, 2004; 42(6): 2530 - 2540.
[Abstract] [Full Text] [PDF]



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