Skip Navigation

This Article
Right arrow Full Text Freely available
Right arrow Print PDF (115K) Freely available
Right arrow Supplementary Material
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrowRequest Permissions
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Lelandais, G.
Right arrow Articles by Marc, P.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Lelandais, G.
Right arrow Articles by Marc, P.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

Nucleic Acids Research, 2004, Vol. 32, Database issue D323-D325
© 2004 Oxford University Press

yMGV: a cross-species expression data mining tool

Gaëlle Lelandais1,3, Stéphane Le Crom2, Frédéric Devaux1, Stéphane Vialette1, George M. Church4, Claude Jacq1 and Philippe Marc*,4

1 Laboratoire de Génétique Moléculaire, CNRS UMR8541 and 2 Laboratoire de Biologie Moléculaire du Développement, INSERM U368, Ecole Normale Supérieure, 46 Rue d’Ulm, 75005 Paris, France, 3 Equipe de Bioinformatique Génomique et Moléculaire, INSERM E346 Université Paris 7, case 7113, 2 place Jussieu, 75005 Paris, France and 4 Lipper Center for Computational Genetics and Department of Genetics, Harvard Medical School, 77 Louis Pasteur Avenue, Boston, MA 02115, USA

*To whom correspondence should be addressed. Tel: +1 617 432 4136; Fax: +1 617 432 7266; Email: pmarc{at}genetics.med.harvard.edu

The yeast Microarray Global Viewer (yMGV @ http://transcriptome.ens.fr/ymgv) was created 3 years ago as a database that houses a collection of Saccharomyces cerevisiae and Schizosaccharo myces pombe microarray data sets published in 82 different articles. yMGV couples data mining tools with a user-friendly web interface so that, with a few mouse clicks, one can identify the conditions that affect the expression of a gene or list of genes regulated in a set of experiments. One of the major new features we present here is a set of tools that allows for inter-organism comparisons. This should enable the fission yeast community to take advantage of the large amount of available information on budding yeast transcriptome. New tools and ongoing developments are also presented here.


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?


This article has been cited by other articles:


Home page
 BioinformaticsHome page
Y. Lu, P. Huggins, and Z. Bar-Joseph
Cross species analysis of microarray expression data
Bioinformatics, June 15, 2009; 25(12): 1476 - 1483.
[Abstract] [Full Text] [PDF]

Home page
 Nucleic Acids ResHome page
T. L. Saito, J. Sese, Y. Nakatani, F. Sano, M. Yukawa, Y. Ohya, and S. Morishita
Data mining tools for the Saccharomyces cerevisiae morphological database
Nucleic Acids Res., July 1, 2005; 33(suppl_2): W753 - W757.
[Abstract] [Full Text] [PDF]

Home page
 J. Biol. Chem.Home page
S. L. Tai, V. M. Boer, P. Daran-Lapujade, M. C. Walsh, J. H. de Winde, J.-M. Daran, and J. T. Pronk
Two-dimensional Transcriptome Analysis in Chemostat Cultures: COMBINATORIAL EFFECTS OF OXYGEN AVAILABILITY AND MACRONUTRIENT LIMITATION IN SACCHAROMYCES CEREVISIAE
J. Biol. Chem., January 7, 2005; 280(1): 437 - 447.
[Abstract] [Full Text] [PDF]

Home page
 Plant Physiol.Home page
P. Zimmermann, M. Hirsch-Hoffmann, L. Hennig, and W. Gruissem
GENEVESTIGATOR. Arabidopsis Microarray Database and Analysis Toolbox
Plant Physiology, September 1, 2004; 136(1): 2621 - 2632.
[Abstract] [Full Text] [PDF]


Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.