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Nucleic Acids Research, 2004, Vol. 32, Database issue D393-D397
© 2004 Oxford University Press

MaizeGDB, the community database for maize genetics and genomics

Carolyn J. Lawrence1, Qunfeng Dong1, Mary L. Polacco3, Trent E. Seigfried1 and Volker Brendel*,1,2

1 Department of Genetics, Development and Cell Biology and 2 Department of Statistics, Iowa State University, Ames, IA 50011-3260, USA and 3 Department of Agronomy, University of Missouri and Agricultural Research Service, United States Department of Agriculture, Columbia, MO 65211, USA

*To whom correspondence should be addressed. Tel: +1 515 294 9884; Fax: +1 515 294 6755; Email: vbrendel{at}iastate.edu

The Maize Genetics and Genomics Database (MaizeGDB) is a central repository for maize sequence, stock, phenotype, genotypic and karyotypic variation, and chromosomal mapping data. In addition, MaizeGDB provides contact information for over 2400 maize cooperative researchers, facilitating interactions between members of the rapidly expanding maize community. MaizeGDB represents the synthesis of all data available previously from ZmDB and from MaizeDB—databases that have been superseded by MaizeGDB. MaizeGDB provides web-based tools for ordering maize stocks from several organizations including the Maize Genetics Cooperation Stock Center and the North Central Regional Plant Introduction Station (NCRPIS). Sequence searches yield records displayed with embedded links to facilitate ordering cloned sequences from various groups including the Maize Gene Discovery Project and the Clemson University Genomics Institute. An intuitive web interface is implemented to facilitate navigation between related data, and analytical tools are embedded within data displays. Web-based curation tools for both designated experts and general researchers are currently under development. MaizeGDB can be accessed at http://www.maizegdb.org/.


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