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Nucleic Acids Research, 2004, Vol. 32, Database issue D476-D481
© 2004 Oxford University Press

The Mouse Genome Database (MGD): integrating biology with the genome

Carol J. Bult, Judith A. Blake*, Joel E. Richardson, James A. Kadin, Janan T. Eppig and the Mouse Genome Database Group

The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA

*To whom correspondence should be addressed. Tel: +1 207 288 6248; Fax: +1 207 288 6132; Email: jblake{at}informatics.jax.org
The Mouse Genome Database Group: R. M. Baldarelli, K. Barsanti, M. Baya, J. S. Beal, W. J. Boddy, D. W. Bradt, D. L. Burkart, N. E. Butler, J. Campbell, R. Corey, L. E. Corbani, S. Cousins, H. Dene, H. J. Drabkin, K. Frazer, D. M. Garippa, L. H. Glass, C. W. Goldsmith, P. L. Grant, B. L. King, M. Lennon-Pierce, J. Lewis, I. Lu, C. M. Lutz, L. J. Maltais, L. M. McKenzie, D. Miers, D. Modrusan, L. Ni, J. E. Ormsby, D. Qi, S. Ramachandran, T. B. K. Reddy, D. J. Reed, R. Sinclair, D. R. Shaw, C. L. Smith, P. Szauter, B. Taylor, P. Vanden Borre, M. Walker, L. Washburn, I. Witham, J. Winslow and Y. Zhu

The Mouse Genome Database (MGD) is one component of the Mouse Genome Informatics (MGI) system (http://www.informatics.jax.org), a community database resource for the laboratory mouse. MGD strives to provide a comprehensive knowledgebase about the mouse with experiments and data annotated from both literature and online sources. MGD curates and presents consensus and experimental data representations of genetic, genotype (sequence) and phenotype information including highly detailed reports about genes and gene products. Primary foci of integration are through representations of relationships between genes, sequences and phenotypes. MGD collaborates with other bioinformatics groups to curate a definitive set of information about the laboratory mouse and to build and implement the data and semantic standards that are essential for comparative genome analysis. Recent developments in MGD discussed here include an extensive integration of the mouse sequence data and substantial revisions in the presentation, query and visualization of sequence data.


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