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SCRATCH: a protein structure and structural feature prediction server
Institute for Genomics and Bioinformatics, University of California Irvine, CA, USA
*To whom correspondence should be addressed. Tel: +1 949 824 5809; Fax: +1 949 824 4056; Email: pfbaldi{at}ics.uci.edu
Received February 13, 2005. Revised March 14, 2005. Accepted March 14, 2005.
SCRATCH is a server for predicting protein tertiary structure and structural features. The SCRATCH software suite includes predictors for secondary structure, relative solvent accessibility, disordered regions, domains, disulfide bridges, single mutation stability, residue contacts versus average, individual residue contacts and tertiary structure. The user simply provides an amino acid sequence and selects the desired predictions, then submits to the server. Results are emailed to the user. The server is available at http://www.igb.uci.edu/servers/psss.html.
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