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Nucleic Acids Research 2006 34(12):3446-3454; doi:10.1093/nar/gkl426
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Published online 13 July 2006

© 2006 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (
http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commerical use, distribution, and reproduction in any medium, provided the original work is properly cited.


Article

A LexA-related protein regulates redox-sensitive expression of the cyanobacterial RNA helicase, crhR

Laura M. Patterson-Fortin, Kimberley R. Colvin and George W. Owttrim*

Department of Biological Sciences, University of Alberta Edmonton, Alberta, Canada T6G 2E9

*To whom correspondence should be addressed. Tel: 780 492 1803; Fax: 780 492 9234; Email: g.owttrim{at}ualberta.ca

Received April 26, 2006. Revised May 26, 2006. Accepted May 27, 2006.

Expression of the cyanobacterial DEAD-box RNA helicase, crhR, is regulated in response to conditions, which elicit reduction of the photosynthetic electron transport chain. A combination of electrophoretic mobility shift assay (EMSA), DNA affinity chromatography and mass spectrometry identified that a LexA-related protein binds specifically to the crhR gene. Transcript analysis indicates that lexA and crhR are divergently expressed, with lexA and crhR transcripts accumulating differentially under conditions, which respectively oxidize and reduce the electron transport chain. In addition, expression of the Synechocystis lexA gene is not DNA damage inducible and its amino acid sequence lacks two of three residues required for activity of prototypical LexA proteins, which repress expression of DNA repair genes in a range of prokaryotes. A direct effect of recombinant LexA protein on crhR expression was confirmed from the observation that LexA reduces crhR expression in a linear manner in an in vitro transcription/translation assay. The results indicate that the Synechocystis LexA-related protein functions as a regulator of redox-responsive crhR gene expression, and not DNA damage repair genes.


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