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Nucleic Acids Research 2006 34(6):1676-1684; doi:10.1093/nar/gkl090
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Published online 22 March 2006

© The Author 2006. Published by Oxford University Press. All rights reserved
The online version of this article has been published under an open access model. Users are entitled to use, reproduce, disseminate, or display the open access version of this article for non-commercial purposes provided that: the original authorship is properly and fully attributed; the Journal and Oxford University Press are attributed as the original place of publication with the correct citation details given; if an article is subsequently reproduced or disseminated not in its entirety but only in part or as a derivative work this must be clearly indicated. For commercial re-use, please contact journals.permissions@oxfordjournals.org


Article

A TFIIB-like protein is indispensable for spliced leader RNA gene transcription in Trypanosoma brucei

Bernd Schimanski1, Jens Brandenburg1, Tu Ngoc Nguyen1, Melissa Jo Caimano2 and Arthur Günzl1,3,*

1Department of Genetics and Developmental Biology, University of Connecticut Health Center Farmington, CT 06030, USA 2Department of Medicine, University of Connecticut Health Center Farmington, CT 06030, USA 3Department of Molecular, Microbial and Structural Biology, University of Connecticut Health Center Farmington, CT 06030, USA

*To whom correspondence should be addressed. Tel: +1 860 679 8878; Fax: +1 860 679 8345; Email: gunzl{at}uchc.edu

Received February 7, 2006. Revised March 7, 2006. Accepted March 7, 2006.

The lack of general class II transcription factors was a hallmark of the genomic sequences of the human parasites Trypanosoma brucei, Trypanosoma cruzi and Leishmania major. However, the recent identification of TFIIA as part of a protein complex essential for RNA polymerase II-mediated transcription of SLRNA genes, which encode the trans splicing-specific spliced leader RNA, suggests that trypanosomatids assemble a highly divergent set of these factors at the SLRNA promoter. Here we report the identification of a trypanosomatid TFIIB-like (TFIIBlike) protein which has limited overall sequence homology to eukaryotic TFIIB and archaeal TFB but harbors conserved residues within the N-terminal zinc ribbon domain, the B finger and cyclin repeat I. In accordance with the function of TFIIB, T.brucei TFIIBlike is encoded by an essential gene, localizes to the nucleus, specifically binds to the SLRNA promoter, interacts with RNA polymerase II, and is absolutely required for SLRNA transcription.


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