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Nucleic Acids Research 2006 34(Database Issue):D504-D506; doi:10.1093/nar/gkj126
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Nucleic Acids Research, 2006, Vol. 34, Database issue D504-D506
© The Author 2006. Published by Oxford University Press. All rights reserved
The online version of this article has been published under an open access model. Users are entitled to use, reproduce, disseminate, or display the open access version of this article for non-commercial purposes provided that: the original authorship is properly and fully attributed; the Journal and Oxford University Press are attributed as the original place of publication with the correct citation details given; if an article is subsequently reproduced or disseminated not in its entirety but only in part or as a derivative work this must be clearly indicated. For commercial re-use, please contact journals.permissions{at}oxfordjournals.org

Article

Pathguide: a Pathway Resource List

Gary D. Bader, Michael P. Cary and Chris Sander*

Computational Biology Center, Memorial Sloan-Kettering Cancer Center 1275 York Avenue, Box 460, New York, NY 10021, USA

*To whom correspondence should be addressed. Tel: +1 646 735 8079; Fax: +1 646 735 0021; Email: pathguide{at}cbio.mskcc.org

Received October 20, 2005. Accepted October 21, 2005.

Pathguide: the Pathway Resource List (http://pathguide.org) is a meta-database that provides an overview of more than 190 web-accessible biological pathway and network databases. These include databases on metabolic pathways, signaling pathways, transcription factor targets, gene regulatory networks, genetic interactions, protein–compound interactions, and protein–protein interactions. The listed databases are maintained by diverse groups in different locations and the information in them is derived either from the scientific literature or from systematic experiments. Pathguide is useful as a starting point for biological pathway analysis and for content aggregation in integrated biological information systems.


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