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Nucleic Acids Research 2006 34(Database Issue):D6-D9; doi:10.1093/nar/gkj111
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Nucleic Acids Research, 2006, Vol. 34, Database issue D6-D9
© The Author 2006. Published by Oxford University Press. All rights reserved
The online version of this article has been published under an open access model. Users are entitled to use, reproduce, disseminate, or display the open access version of this article for non-commercial purposes provided that: the original authorship is properly and fully attributed; the Journal and Oxford University Press are attributed as the original place of publication with the correct citation details given; if an article is subsequently reproduced or disseminated not in its entirety but only in part or as a derivative work this must be clearly indicated. For commercial re-use, please contact journals.permissions{at}oxfordjournals.org


Article

DDBJ in preparation for overview of research activities behind data submissions

Kousaku Okubo, Hideaki Sugawara, Takashi Gojobori and Yoshio Tateno*

Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics Research Organization of Information and Systems Yata, Mishima, 411-8540, Japan

*To whom correspondence should be addressed. Tel: +81 55 981 6857; Fax: +81 55 981 6858; Email: ytateno{at}genes.nig.ac.jp

Received September 14, 2005. Revised October 18, 2005. Accepted October 18, 2005.

In the past year, DDBJ (http://www.ddbj.nig.ac.jp) collected and released 1 956 826 entries or 1 741 313 111 bases. The released data include ~90 000 ESTs and cDNAs of Macaca fascicularis, and 280 million bases of mouse GSS. In addition to the data collection, we have indexed the submitted data to the International Nucleotide Sequence Database Collaboration (INSDC, http://www.insdc.org) to classify the entries into research projects behind data submissions. They are expected to be useful to the data submitters and users for enhancing the data submission, retrieval and systematic data analyses at INSDC. The results of indexing also allow one to grasp research projects in life sciences that promoted and produced the DNA sequences submitted to INSDC.


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