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Nucleic Acids Research 2006 34(Web Server issue):W700-W703; doi:10.1093/nar/gkl042
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© The Author 2006. Published by Oxford University Press. All rights reserved
The online version of this article has been published under an open access model. Users are entitled to use, reproduce, disseminate, or display the open access version of this article for non-commercial purposes provided that: the original authorship is properly and fully attributed; the Journal and Oxford University Press are attributed as the original place of publication with the correct citation details given; if an article is subsequently reproduced or disseminated not in its entirety but only in part or as a derivative work this must be clearly indicated. For commercial re-use, please contact journals.permissions@oxfordjournals.org


Article

ModelTest Server: a web-based tool for the statistical selection of models of nucleotide substitution online

David Posada*

Departamento de Bioquímica, Genética e Inmunología. Universidad de Vigo 36310 Vigo, Spain

*Tel: +34 986 813028; Fax: +34 986 812556; Email: dposada{at}uvigo.es

Received January 5, 2006. Revised January 31, 2006. Accepted January 31, 2006.

ModelTest server is a web-based application for the selection of models of nucleotide substitution using the program ModelTest. The server takes as input a text file with likelihood scores for the set of candidate models. Models can be selected with hierarchical likelihood ratio tests, or with the Akaike or Bayesian information criteria. The output includes several statistics for the assessment of model selection uncertainty, for model averaging or to estimate the relative importance of model parameters. The server can be accessed at http://darwin.uvigo.es/software/modeltest_server.html.


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