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Nucleic Acids Research Advance Access originally published online on December 7, 2006
Nucleic Acids Research 2007 35(1):203-213; doi:10.1093/nar/gkl1068
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Nucleic Acids Research, 2007, Vol. 35, No. 1 203-213
© 2006 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.


Molecular Biology

Exploring membrane-associated NAC transcription factors in Arabidopsis: implications for membrane biology in genome regulation

Sun-Young Kim, Sang-Gyu Kim, Youn-Sung Kim, Pil Joon Seo, Mikyoung Bae, Hye-Kyung Yoon and Chung-Mo Park*

Molecular Signaling Laboratory, Department of Chemistry, Seoul National University Seoul 151-742, Korea

*To whom correspondence should be addressed. Tel: +82 2 880 6640; Fax: +82 2 889 1568; Email: cmpark{at}snu.ac.kr

Received September 1, 2006. Revised November 8, 2006. Accepted November 8, 2006.

Controlled proteolytic cleavage of membrane-associated transcription factors (MTFs) is an intriguing activation strategy that ensures rapid transcriptional responses to incoming stimuli. Several MTFs are known to regulate diverse cellular functions in prokaryotes, yeast, and animals. In Arabidopsis, a few NAC MTFs mediate either cytokinin signaling during cell division or endoplasmic reticulum (ER) stress responses. Through genome-wide analysis, it was found that at least 13 members of the NAC family in Arabidopsis contain strong {alpha}-helical transmembrane motifs (TMs) in their C-terminal regions and are predicted to be membrane-associated. Interestingly, most of the putative NAC MTF genes are up-regulated by stress conditions, suggesting that they may be involved in stress responses. Notably, transgenic studies revealed that membrane release is essential for the function of NAC MTFs. Transgenic plants overexpressing partial-size NAC constructs devoid of the TMs, but not those overexpressing full-size constructs, showed distinct phenotypic changes, including dwarfed growth and delayed flowering. The rice genome also contains more than six NAC MTFs. Furthermore, the presence of numerous MTFs is predicted in the whole transcription factors in plants. We thus propose that proteolytic activation of MTFs is a genome-wide mechanism regulating plant genomes.


The authors wish it to be known that, in their opinion, the first three authors should be regarded as joint First Authors


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Plant CellHome page
J.-X. Liu, R. Srivastava, P. Che, and S. H. Howell
An Endoplasmic Reticulum Stress Response in Arabidopsis Is Mediated by Proteolytic Processing and Nuclear Relocation of a Membrane-Associated Transcription Factor, bZIP28
PLANT CELL, December 1, 2007; 19(12): 4111 - 4119.
[Abstract] [Full Text] [PDF]



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