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Nucleic Acids Research Advance Access originally published online on November 11, 2006
Nucleic Acids Research 2007 35(Database issue):D506-D510; doi:10.1093/nar/gkl818
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Nucleic Acids Research, 2007, Vol. 35, Database issue D506-D510
© 2006 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

Articles

WormBase: new content and better access

Tamberlyn Bieri*, Darin Blasiar, Philip Ozersky, Igor Antoshechkin1, Carol Bastiani1, Payan Canaran3, Juancarlos Chan1, Nansheng Chen3, Wen J. Chen1, Paul Davis4, Tristan J. Fiedler3, Lisa Girard1, Michael Han4, Todd W. Harris3, Ranjana Kishore1, Raymond Lee1, Sheldon McKay3, Hans-Michael Müller1, Cecilia Nakamura1, Andrei Petcherski1, Arun Rangarajan1, Anthony Rogers4, Gary Schindelman1, Erich M. Schwarz1, Will Spooner3, Mary Ann Tuli4, Kimberly Van Auken1, Daniel Wang1, Xiaodong Wang1, Gary Williams4, Richard Durbin4, Lincoln D. Stein3, Paul W. Sternberg1,2 and John Spieth

Genome Sequencing Center, Washington University School of Medicine St Louis, MO 63108, USA 1 Division of Biology 156-29, Pasadena, CA 91125, USA 2 Howard Hughes Medical Institute, California Institute of Technology Pasadena, CA 91125, USA 3 Cold Spring Harbor Laboratory, 1 Bungtown Road Cold Spring Harbor, NY 11724, USA 4 Sanger Institute, Wellcome Trust Genome Campus Hinxton, Cambridgeshire CB10 1SA, UK

*To whom correspondence should be addressed. Tel: +1 314 286 1957; Fax: +1 314 286 1810; Email: tbieri{at}watson.wustl.edu

Received September 14, 2006. Revised October 3, 2006. Accepted October 4, 2006.

WormBase (http://wormbase.org), a model organism database for Caenorhabditis elegans and other related nematodes, continues to evolve and expand. Over the past year WormBase has added new data on C.elegans, including data on classical genetics, cell biology and functional genomics; expanded the annotation of closely related nematodes with a new genome browser for Caenorhabditis remanei; and deployed new hardware for stronger performance. Several existing datasets including phenotype descriptions and RNAi experiments have seen a large increase in new content. New datasets such as the C.remanei draft assembly and annotations, the Vancouver Fosmid library and TEC-RED 5' end sites are now available as well. Access to and searching WormBase has become more dependable and flexible via multiple mirror sites and indexing through Google.


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