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Nucleic Acids Research Advance Access originally published online on November 14, 2007
Nucleic Acids Research 2008 36(Database issue):D753-D760; doi:10.1093/nar/gkm987
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Nucleic Acids Research, 2008, Vol. 36, Database issue D753-D760
© 2007 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

This article appears in the following Nucleic Acids Research issue: Database issue [View the issue table of contents]

Articles

The vertebrate genome annotation (Vega) database

L. G. Wilming*, J. G. R. Gilbert, K. Howe, S. Trevanion, T. Hubbard and J. L. Harrow

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK

*To whom correspondence should be addressed. Tel: +44 1223 496843; Fax: +44 1223 496802; Email: lw2{at}sanger.ac.uk

Received September 15, 2007. Revised October 18, 2007. Accepted October 19, 2007.

The Vertebrate Genome Annotation (Vega) database (http://vega.sanger.ac.uk) was first made public in 2004 and has been designed to view manual annotation of human, mouse and zebrafish genomic sequences produced at the Wellcome Trust Sanger Institute. Since its initial release, the number of human annotated loci has more than doubled to close to 33 000 and now contains comprehensive annotation on 20 of the 24 human chromosomes, four whole mouse chromosomes and around 40% of the zebrafish Danio rerio genome. In addition, we offer manual annotation of a number of haplotype regions in mouse and human and regions of comparative interest in pig and dog that are unique to Vega.


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