Nucleic Acids Research, 1977, Vol. 4, No. 6 1837-1852
© 1977
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Salt and divalent cations affect the flexible nature of the natural beaded chromatin structure
Biochemistry Department, Stanford University Medical School Stanford, CA, USA
Received February 15, 1977. A natural chromatin containing simian virus 40 (SV40) DNA and his-tone has been used to examine changes in chromatin structure caused by various physical and chemical treatments. We find that histone HI depleted chromatin is more compact in solutions of 0.15M NaCl or 2 mM MgCl2 than in 0.01 M NaCl or 0.6M NaCl, and is compact in 0.01 M NaCl solutions if histone HI is present. Even high concentrations of urea did not alter the fundamental beaded structure, consisting of 110Å beads of 200 base pair content, each joined by thin DNA bridges of 50 base pairs. The physical bead observed by EM therefore contains more DNA than the 140 base pair "core particle". The natural variation in the bridge length is consistent with the broad bands observed after nuclease digestion of chromatin. Chromatin prepared for EM without fixation contained long 20Å to 30Å fibers possibly complexed with protein.
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