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Nucleic Acids Research, 1980, Vol. 8, No. 17 3983-3992
© 1980

CHEMISTRY

Role of interaction energy in the Specificity of transcription. II-The Watson Crick A-C base pair template

Nitish K. Sanyal, U. Kumar and Mihir Roychoudhury

Department of Physics, University of Gorakhpur Gorakhpur 273001, India

Received May 27, 1980. In continuation with work regarding the evaluation of the energy or association or various RNA bases with various bass pairs, the results or the computations of the electrostatic interaction energy or A-U base pair with four RNa bases viz. Adenine, Uracil, Guanine and Cytosine have been reported. Non bonded induced polarization and dispersion potentials are not taken into account. Electrostatic hard sphere model or Nash and Bradley has been employed. Computations have been performed to find out the minimum energy configuration out of the various possible complex configurations. Results have been discussed with reference to similar calculations with G-C base pair performed by the authors.


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