Nucleic Acids Research, 1980, Vol. 8, No. 7 1535-1550
© 1980
Articles |
Structure of a promotor on plasmid pMB9 derived from plasmid pSC101
*Laboratory of Molecular Genetics, University of Leiden Netherlands +Laboratory of Physiological Chemistry, University of Leiden Netherlands
*Address Correspondence to: H.Pannekoek, Laboratory of Molecular Genetics, Biochemical Laboratory, Wassenaarseweg 64, Leiden, Netherlands
Received January 2, 1980. The DNA sequence of a 354 basepair EcoRI-HindIII fragment of plasmid pMB9 which has originally been derived from plasmid pSC101 has been resolved. This fragment contains a promotor for transcription directed towards the EcoRI site. Escherichia coli RNA polymerase binds to a region within the EcoRI-HindIII fragment which contains the heptamer 5' TATGGTG (132126) and the duodecamer 5' TGATGAACATCA (158147). Based on commonalities with other promotors these DNA sequences probably function as, respectively, "binding site" and "recognition site". Furthermore, this fragment harbours a translation reading frame free of nonsense codons and at about 25 basepairs from the indicated heptamer a nucleotide sequence which meets with the requirements for initiation of translation. By heteroduplex mapping it was shown that the EcoRI-HindIII fragment has been derived from a region near or within the origin of replication of pSC101. The copynumber of plasmids containing the EcoRI-HindIII fragment is two-fold lower than that of plasmids lacking this fragment. This effect might be related to the original function of this fragment on plasmid pSC101.