Skip Navigation



Nucleic Acids Research Advance Access published online on June 21, 2007
Nucleic Acids Research, doi:10.1093/nar/gkm344
This Article
Right arrow Full Text Freely available
Right arrow Print PDF (4175K) Freely available
Right arrow Screen PDF (557K) Freely available
Right arrow Supplementary Material
Right arrowOA All Versions of this Article:
35/suppl_2/W292    most recent
gkm344v1
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Add to My Personal Archive
Right arrow Download to citation manager
Right arrow Commercial Re-use Guidelines
for Open Access NAR Content
Google Scholar
Right arrow Articles by Lacroix, Z.
Right arrow Articles by Snyder, B.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Lacroix, Z.
Right arrow Articles by Snyder, B.
Social Bookmarking
Add to CiteULike   Add to Connotea   Add to Del.icio.us  
What's this?

© 2007 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

Web Server Issue

BIPASS: BioInformatics Pipeline Alternative Splicing Services

Zoé Lacroix1,*, Christophe Legendre1, Louiqa Raschid2 and Ben Snyder2

1Scientific Data Management Laboratory, Arizona State University, PO Box 875706, Tempe AZ 85287-5706 and 2Department of Computer Science, University of Maryland, College Park, MD 20742, USA

*To whom correspondence should be addressed. Tel: (480) 727 6935; Fax: (480) 965-8325; Email: Zoe.Lacroix{at}asu.edu

Received January 31, 2007. Revised April 14, 2007. Accepted April 22, 2007.

BioInformatics Pipeline Alternative Splicing Services (BIPASS) offer support to scientists interested in gathering information related to alternative splicing (AS) events. The service BIPAS–SpliceDB provides access to AS information that has been extracted a priori from various public databases and stored in a data warehouse. In contrast, the BIPAS–Align&Splice service allows scientists to submit their own sequences and genome to compute AS analysis results. BIPAS services offer various user-friendly ways to navigate through the results. AS results are organized at different conceptual levels (clusters and sequences), and are displayed in graphs or summarized in tables that can be downloaded in XML or text format. The two BIPAS services SpliceDB and Align&Splice are available online at http://bip.umiacs.umd.edu:8080/.

The authors wish it to be known that, in their opinion, all authors should be regarded as joint First Authors.


Add to CiteULike CiteULike   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us    What's this?




Disclaimer: Please note that abstracts for content published before 1996 were created through digital scanning and may therefore not exactly replicate the text of the original print issues. All efforts have been made to ensure accuracy, but the Publisher will not be held responsible for any remaining inaccuracies. If you require any further clarification, please contact our Customer Services Department.