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Nucleic Acids Research Advance Access published online on May 16, 2008
Nucleic Acids Research, doi:10.1093/nar/gkn270
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© 2008 The Author(s)
This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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soaPDB: a web application for searching the Protein Data Bank, organizing results, and receiving automatic email alerts

Charles A. Lesburg* and José S. Duca

Department of Drug Design, Schering-Plough Research Institute, 2015 Galloping Hill Road, Kenilworth, NJ 07033, USA

*To whom correspondence should be addressed. Tel: +1 908 740 3515; Fax: +1 908 740 7664; Email: charles.lesburg{at}spcorp.com

Received January 2, 2008. Revised March 26, 2008. Accepted April 21, 2008.

soaPDB is a web application that allows generation and organization of saved PDB searches, and offers automatic email alerts. This tool is used from a web interface to store PDB searches and results in a backend relational database. Written using the Ruby on Rails open-source web framework, soaPDB is easy to deploy, maintain and customize. soaPDB is freely available upon request for local installation and is also available at http://soapdb.dyndns.org:3000.

The authors wish it to be known that, in their opinion, the first two authors should be regarded as joint First Authors


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