Nucleic Acids Research

Articles:

Carolyn M. Tolstoshev and Robert W. Blakesley

RSITE: a computer program to predict the recognition sequence of a restriction enzyme
Nucl. Acids Res. 1982 10: 1-17; doi:10.1093/nar/10.1.1 [Abstract] [Print PDF] [Request Permissions]  

David M.J. Lilley

A simple computer program for calculating, modifying and drawing circular restriction maps
Nucl. Acids Res. 1982 10: 19-26; doi:10.1093/nar/10.1.19 [Abstract] [Print PDF] [Request Permissions]  

James A. Lautenberger

A program for reading DNA sequence gels using a small computer equipped with a graphics tablet
Nucl. Acids Res. 1982 10: 27-30; doi:10.1093/nar/10.1.27 [Abstract] [Print PDF] [Request Permissions]  

Bruce Conrad and David W. Mount

Microcomputer programs for DNA sequence analysis
Nucl. Acids Res. 1982 10: 31-38; doi:10.1093/nar/10.1.31 [Abstract] [Print PDF] [Request Permissions]  

Roger Larson and Joachim Messing

Apple II software for M13 shotgun DNA sequencing
Nucl. Acids Res. 1982 10: 39-49; doi:10.1093/nar/10.1.39 [Abstract] [Print PDF] [Request Permissions]  

James Pustell and Fotis C. Kafatos

A convenient and adaptable package of DNA sequence analysis programs for microcomputers
Nucl. Acids Res. 1982 10: 51-59; doi:10.1093/nar/10.1.51 [Abstract] [Print PDF] [Request Permissions]  

A.D. Delaney

A DNA sequence handling program
Nucl. Acids Res. 1982 10: 61-67; doi:10.1093/nar/10.1.61 [Abstract] [Print PDF] [Request Permissions]  

John L. Schroeder and Frederick R. Blattner

Formal description of a DNA oriented computer language
Nucl. Acids Res. 1982 10: 69-84; doi:10.1093/nar/10.1.69 [Abstract] [Print PDF] [Request Permissions]  

Katsumi Isono

Computer programs to analyze DNA and amino acid sequence data
Nucl. Acids Res. 1982 10: 85-89; doi:10.1093/nar/10.1.85 [Abstract] [Print PDF] [Request Permissions]  

R.M. Blumenthal, P.J. Rice, and R.J. Roberts

Computer programs for nucleic acid sequence manipulation
Nucl. Acids Res. 1982 10: 91-101; doi:10.1093/nar/10.1.91 [Abstract] [Print PDF] [Request Permissions]  

Thomas R. Gingeras, P. Rice, and R.J. Roberts

A semi-automated method for the reading of nucleic acid sequencing gels
Nucl. Acids Res. 1982 10: 103-114; doi:10.1093/nar/10.1.103 [Abstract] [Print PDF] [Request Permissions]  

Peter A. Stockwell

A large database DNA sequence handling program with generalized searching specifications
Nucl. Acids Res. 1982 10: 115-125; doi:10.1093/nar/10.1.115 [Abstract] [Print PDF] [Request Permissions]  

Jiri Novotny

Matrix program to analyze primary structure homology
Nucl. Acids Res. 1982 10: 127-131; doi:10.1093/nar/10.1.127 [Abstract] [Print PDF] [Request Permissions]  

Joseph Felsenstein, Stanley Sawyer, and Rochelle Kochin

An efficient method for matching nucleic acid sequences
Nucl. Acids Res. 1982 10: 133-139; doi:10.1093/nar/10.1.133 [Abstract] [Print PDF] [Request Permissions]  

R. Staden and A.D. McLachian

Codon preference and its use in identifying protein coding regions in long DNA sequences
Nucl. Acids Res. 1982 10: 141-156; doi:10.1093/nar/10.1.141 [Abstract] [Print PDF] [Request Permissions]  

B.C. Orcutt, D.G. George, J.A. Fredrickson, and M.O. Dayhoff

Nucleic acid squence database computer system
Nucl. Acids Res. 1982 10: 157-174; doi:10.1093/nar/10.1.157 [Print PDF] [Request Permissions]  

Roberto Patarca, Blas Dorta, and José Luis Ramirez

Creation of a data base for sequences of ribdsomal nucleic acids and detection of conserved restriction endonucleases sites through computerized processing
Nucl. Acids Res. 1982 10: 175-182; doi:10.1093/nar/10.1.175 [Abstract] [Print PDF] [Request Permissions]  

Minoru I. Kanehisa

Los Alamos sequence analysis package for nucleic acids and proteins
Nucl. Acids Res. 1982 10: 183-196; doi:10.1093/nar/10.1.183 [Abstract] [Print PDF] [Request Permissions]  

Jean-Pierre Dumas and Jacques Ninio

Efficient algorithms for folding and comparing nucleic acid sequences
Nucl. Acids Res. 1982 10: 197-206; doi:10.1093/nar/10.1.197 [Abstract] [Print PDF] [Request Permissions]  

G. Osterburg, K.H. Glatting, and R. Sommer

Computer program for the analysis and the management of DNA sequences
Nucl. Acids Res. 1982 10: 207-216; doi:10.1093/nar/10.1.207 [Abstract] [Print PDF] [Request Permissions]  

William R. Pearson

Automatic construction of restriction site maps
Nucl. Acids Res. 1982 10: 217-227; doi:10.1093/nar/10.1.217 [Abstract] [Print PDF] [Request Permissions]  

Manfred Kröger and Anneliese Kröger-Block

A flexible new computer program for handling DNA squence data
Nucl. Acids Res. 1982 10: 229-236; doi:10.1093/nar/10.1.229 [Abstract] [Print PDF] [Request Permissions]  

Robert Peter Aaronson, James F. Young, and Peter Palese

Oligonucleotide mapping: evaluation of its sensitivity by computer-simulation
Nucl. Acids Res. 1982 10: 237-246; doi:10.1093/nar/10.1.237 [Abstract] [Print PDF] [Request Permissions]  

Walter B. Goad and Minoru I. Kanehisa

Pattern recognition in nucleic acid sequences. I. A general method for finding local homologies and symmetries
Nucl. Acids Res. 1982 10: 247-263; doi:10.1093/nar/10.1.247 [Abstract] [Print PDF] [Request Permissions]  

Minoru I. Kanehisa and Walter B. Goad

Pattern recognition in nucleic acid sequences. II. An efficient method for finding locally stable secondary structures
Nucl. Acids Res. 1982 10: 265-278; doi:10.1093/nar/10.1.265 [Abstract] [Print PDF] [Request Permissions]  

D.L. Brutlag, J. Clayton, P. Friedland, and L.H. Kedes

SEQ: a nucleotide sequence analysis and recombination system
Nucl. Acids Res. 1982 10: 279-294; doi:10.1093/nar/10.1.279 [Abstract] [Print PDF] [Request Permissions]  

Rene Bach, Peter Friedland, Douglas L. Brutlag, and Larry Kedes

MAXAMIZE. A DNA sequencing strategy advisor
Nucl. Acids Res. 1982 10: 295-304; doi:10.1093/nar/10.1.295 [Abstract] [Print PDF] [Request Permissions]  

Jan Clayton and Larry Kedes

GEL, a DNA sequencing project management system
Nucl. Acids Res. 1982 10: 305-321; doi:10.1093/nar/10.1.305 [Abstract] [Print PDF] [Request Permissions]  

Peter Friedland, Larry Kedes, Douglas Brutlag, Yumi Iwasaki, and Rene Bach

GENESIS, a knowledge-based genetic engineering simulation system for represntation of genetic data and experiment planning
Nucl. Acids Res. 1982 10: 323-340; doi:10.1093/nar/10.1.323 [Abstract] [Print PDF] [Request Permissions]  

Ruth Nussinov, Ignacio Tinoco, Jr., and Ann B. Jacobson

Small changes in free energy assignments for unpaid bases do not affect predicted secondary structures in single stranded RNA
Nucl. Acids Res. 1982 10: 341-349; doi:10.1093/nar/10.1.341 [Abstract] [Print PDF] [Request Permissions]  

Ruth Nussinov, Ignacio Tinoco, Jr., and Ann B. Jacobson

Secondary structure model for the complete simian virus 40 Late precursor mRNA
Nucl. Acids Res. 1982 10: 351-363; doi:10.1093/nar/10.1.351 [Abstract] [Print PDF] [Request Permissions]  

Robert Harr, Per Hagblom, and Petter Gustafsso

Two-dimensional graphic analysis of DNA sequence homologies
Nucl. Acids Res. 1982 10: 365-374; doi:10.1093/nar/10.1.365 [Abstract] [Print PDF] [Request Permissions]  

Robert D. Sege and E.H. Saxberg

A statistical test for comparing sveral nucleotide sequences
Nucl. Acids Res. 1982 10: 375-389; doi:10.1093/nar/10.1.375 [Abstract] [Print PDF] [Request Permissions]  

Francis Rodier, Jaime Gabarro-Arpa, Ricardo Ehrlich, and Claude Reiss

Key for protein coding sequence identification: computer analysis of codon strategy
Nucl. Acids Res. 1982 10: 391-402; doi:10.1093/nar/10.1.391 [Abstract] [Print PDF] [Request Permissions]  

Philip E. Auron, Wayne P. Rindone, Calvin P.H. Vary, James J. Celentano, and John N. Vournakis

Computer-aided prediction of RNA secondary structures
Nucl. Acids Res. 1982 10: 403-419; doi:10.1093/nar/10.1.403 [Abstract] [Print PDF] [Request Permissions]  

David Sankoff, R.J. Cedergren, and W. McKay

A strategy for sequence phylogeny research
Nucl. Acids Res. 1982 10: 421-431; doi:10.1093/nar/10.1.421 [Abstract] [Print PDF] [Request Permissions]  

Pudur Jagadeeswaran and Paul M. McGuire, Jr.

Interactive computer programs in sequence data analysis
Nucl. Acids Res. 1982 10: 433-447; doi:10.1093/nar/10.1.433 [Abstract] [Print PDF] [Request Permissions]  

Cary Queen, Mark N. Wegman, and Laurence Jay Korn

Improvements to a program for DNA analysin: a procedure to find homologies among many sequences
Nucl. Acids Res. 1982 10: 449-456; doi:10.1093/nar/10.1.449 [Abstract] [Print PDF] [Request Permissions]  

Author Index:

Author Index
Nucl. Acids Res. 1982 10: 457; doi:10.1093/nar/10.1.457 [Print PDF] [Request Permissions]  

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