Nucl. Acids Res. -- Table of Contents (19 [14, July 25 1991])

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Contents: Volume 19, Number 14    25 July 1991    [Index by Author]

       Editorial

       SURVEY AND SUMMARY

       MOLECULAR BIOLOGY

       METHODS

       Erratum

       Author Index

       ENZYMOLOGY

       GENOME STRUCTURE AND MAPPING

       FOR THE RECORD SEQUENCE

       HUMAN DNA MARKERS

       NUCLEOTIDE SEQUENCE UPDATE

Other Issues:

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Editorial:

: Deposition of atomic coordinates and other data for crystal structures: Notes for Authors
Nucl. Acids Res. 1991 19: 3793; doi:10.1093/nar/19.14.3793 [Print PDF] [Request Permissions]

SURVEY AND SUMMARY:

Lan J. Jackson: A reappraisal of non-consensus mRNA splice sites
Nucl. Acids Res. 1991 19: 3795-3798; doi:10.1093/nar/19.14.3795 [Print PDF] [Request Permissions]

MOLECULAR BIOLOGY:

I.J. Jackson, D.M. Chambers, P.S. Budd, and R. Johnson: The tyrosinase-related protein-1 gene has a structure and promoter sequence very different from tyrosinase
Nucl. Acids Res. 1991 19: 3799-3804; doi:10.1093/nar/19.14.3799 [Abstract] [Print PDF] [Request Permissions]

Shih-Yi Shiue, Jui-Cheng Hsieh, and Junetsu Ito: Mapping of the DNA linking tyrosine residue of the PRD1 terminal protein
Nucl. Acids Res. 1991 19: 3805-3810; doi:10.1093/nar/19.14.3805 [Abstract] [Print PDF] [Request Permissions]

Satish Raina and Georpopoulos Costa: The htrM gene, whose product is essential for Escherichia coli viability only at elevated temperatures, is identical to the rfaD gene
Nucl. Acids Res. 1991 19: 3811-3819; doi:10.1093/nar/19.14.3811 [Abstract] [Print PDF] [Request Permissions]

Dik C. van Gent, Ype Elgersma, Marian W.J. Bolk, Cornelis Vink, and Ronald H.A. Plasterk: DNA binding properties of the integrase proteins of human immunodeficiency viruses types 1 and 2
Nucl. Acids Res. 1991 19: 3821-3827; doi:10.1093/nar/19.14.3821 [Abstract] [Print PDF] [Request Permissions]

Jane E. Itzhaki and Andrew C.G. Porter: Targeted disruption of a human interferon-inducible gene detected by secretion of human growth hormone
Nucl. Acids Res. 1991 19: 3835-3842; doi:10.1093/nar/19.14.3835 [Abstract] [Print PDF] [Request Permissions]

Tomoki Chiba, Yoji Ikawa, and Kazuo Todokoro: GATA-1 transactivates erythropoietin receptor gene, and erythropoietin receptor-mediated signals enhance GATA-1 gene expression
Nucl. Acids Res. 1991 19: 3843-3848; doi:10.1093/nar/19.14.3843 [Abstract] [Print PDF] [Request Permissions]

Robert Krieg, Rolf Stucka, Shawna Clark, and Horst Feldmann: The use of a synthetic tRNA gene as a novel approach to study in vivo transcription and chromatin structure in yeast
Nucl. Acids Res. 1991 19: 3849-3855; doi:10.1093/nar/19.14.3849 [Abstract] [Print PDF] [Request Permissions]

Bertrand Séraphin, Nadja Abovich, and Michael Rosbash: Genetic depletion indicates a late role for U5 snRNP during in vitro spliceosome assembly
Nucl. Acids Res. 1991 19: 3857-3860; doi:10.1093/nar/19.14.3857 [Abstract] [Print PDF] [Request Permissions]

J.A. Proffitt, P.S. Jagger, G.A. Wilson, J.T.J. Donovan, D.C.C. Widdowson, and B.D. Hames: A developmentally regulated gene encodes the dictyostelium homolog of yeast ribosomal protein S4 and mammalian LLRep3 proteins
Nucl. Acids Res. 1991 19: 3867-3873; doi:10.1093/nar/19.14.3867 [Abstract] [Print PDF] [Request Permissions]

Cheryl A. Grosshans and Thomas R. Cech: A hammerhead ribozyme allows synthesis of a new form of the Tetrahymena ribozyme homogeneous in length with a 3' end blocked for transesterification
Nucl. Acids Res. 1991 19: 3875-3880; doi:10.1093/nar/19.14.3875 [Abstract] [Print PDF] [Request Permissions]

Elisabeth Cousin, Robert L. Medcalf, Gabriela E. Bergonzelli, and Egbert K.O. Kruithof: Regulatory elements involved in constitutive and phorbol ester-inducible expression of the plasminogen activator inhibitor type 2 gene promoter
Nucl. Acids Res. 1991 19: 3881-3886; doi:10.1093/nar/19.14.3881 [Abstract] [Print PDF] [Request Permissions]

R. Gnffais, P.M. André, and M. Thibon: K-tuple frequency in the human genome and polymerase chain reaction
Nucl. Acids Res. 1991 19: 3887-3891; doi:10.1093/nar/19.14.3887 [Abstract] [Print PDF] [Request Permissions]

Ami Aronheim, Helena Ohlsson, Cheol Won Park, Thomas Edlund, and Michael D. Walker: Distribution and characterization of helix-loop-helix enhancer-binding proteins from pancreatic ß cells and lymphocytes
Nucl. Acids Res. 1991 19: 3893-3899; doi:10.1093/nar/19.14.3893 [Abstract] [Print PDF] [Request Permissions]

James C. Pierce, Daochun Kong, and Warren Masker: The effect of the length of direct repeats and the presence of palindromes on deletion between directly repeated DNA sequences in bacteriophage T7
Nucl. Acids Res. 1991 19: 3901-3905; doi:10.1093/nar/19.14.3901 [Abstract] [Print PDF] [Request Permissions]

Simon Dear and Rodger Staden: A sequence assembly and editing program for efficient management of large projects
Nucl. Acids Res. 1991 19: 3907-3911; doi:10.1093/nar/19.14.3907 [Abstract] [Print PDF] [Request Permissions]

Kathy M. Howe and Roger J. Watson: Nucleotide preferences in sequence-specific recognition of DNA by c-myb protein
Nucl. Acids Res. 1991 19: 3913-3919; doi:10.1093/nar/19.14.3913 [Abstract] [Print PDF] [Request Permissions]

Jorma J. Palvimo, Leonard M. Eisenberg, and Olli A. Jänne: Protein-DNA interactions in the cAMP responsive promoter region of the murine ornithine decarboxylase gene
Nucl. Acids Res. 1991 19: 3921-3927; doi:10.1093/nar/19.14.3921 [Abstract] [Print PDF] [Request Permissions]

Yong Zhang, Mazie Y. Coyne, Stephen G. Will, Corey H. Levenson, and Ernest S. Kawasaki: Single-base mutational analysis of cancer and genetic diseases using membrane bound modified oligonucleotides
Nucl. Acids Res. 1991 19: 3929-3933; doi:10.1093/nar/19.14.3929 [Abstract] [Print PDF] [Request Permissions]

Tomoyuki Shinomiya and Sawako Ina: Analysis of chromosomal replicons in early embryos of Drosophila melanogaster by two-dimensional gel electrophoresis
Nucl. Acids Res. 1991 19: 3935-3941; doi:10.1093/nar/19.14.3935 [Abstract] [Print PDF] [Request Permissions]

Hitoshi Sawa and Yoshiro Shimura: Alterations of RNase H sensitivity of the 3' splice site region during the in vitro splicing reaction
Nucl. Acids Res. 1991 19: 3953-3958; doi:10.1093/nar/19.14.3953 [Abstract] [Print PDF] [Request Permissions]

Masuo Goto, Taka-aki Tamura, Katsuhiko Mikoshiba, Yukito Masamune, and Yoshinobu Nakanishi: Transcription inhibition of the somatic-type phosphoglycerate kinase 1 gene in vitro by a testis-specific factor that recognizes a sequence similar to the binding site for Ets oncoproteins
Nucl. Acids Res. 1991 19: 3959-3963; doi:10.1093/nar/19.14.3959 [Abstract] [Print PDF] [Request Permissions]

Pedro J. Bonilla, Svend O. Freytag, and Leonard C. Lutter: Enhancer-activated plasmid transcription complexes contain constrained supercoiling
Nucl. Acids Res. 1991 19: 3965-3971; doi:10.1093/nar/19.14.3965 [Abstract] [Print PDF] [Request Permissions]

Daniel Leclerc, Pierre Melancon, and Léa Brakier-Gingras: Mutations in the 915 region of Escherichia coli 16S ribosomal RNA reduce the binding of streptomycin to the ribosome
Nucl. Acids Res. 1991 19: 3973-3977; doi:10.1093/nar/19.14.3973 [Abstract] [Print PDF] [Request Permissions]

Barbara S. Chapman, Richard M. Thayer, Karen A. Vincent, and Nancy L. Haigwood: Effect of intron A from human cytomegalovirus (Towne) immediate-early gene on heterologous expression in mammalian cells
Nucl. Acids Res. 1991 19: 3979-3986; doi:10.1093/nar/19.14.3979 [Abstract] [Print PDF] [Request Permissions]

John M. Lopes and Susan A. Henry: Interaction of trans and cis regulatory elements in the INO1 promoter of Saccharomyces cerevisiae
Nucl. Acids Res. 1991 19: 3987-3994; doi:10.1093/nar/19.14.3987 [Abstract] [Print PDF] [Request Permissions]

METHODS:

Robert J. Harvey and Mark G. Darlison: Random-primed cDNA synthesis facilitates the isolation of multiple 5'-cDNA ends by RACE
Nucl. Acids Res. 1991 19: 4002; doi:10.1093/nar/19.14.4002 [Print PDF] [Request Permissions]

Ichiro Hirao, Satoko Yoshizawa, and Kin-ichiro Miura: Gel electrophoresis using a fluorescence agent for analysis and purification of non-labeled synthetic DNA fragments
Nucl. Acids Res. 1991 19: 4003; doi:10.1093/nar/19.14.4003 [Print PDF] [Request Permissions]

John E. Stacy, Rolf A. Ims, Nils C. Stenseth, and S. Jakobsen: Fingerprinting of diverse species with DNA probes generated from immobilized single-stranded DNA templates
Nucl. Acids Res. 1991 19: 4004; doi:10.1093/nar/19.14.4004 [Print PDF] [Request Permissions]

Abraham Fainsod, Yael Margalit, Rececca Haffner, and Yosef Gruenbaum: Non-immunological precipitation of protein-DNA complexes using glutathione-S-transferase fusion proteins
Nucl. Acids Res. 1991 19: 4005; doi:10.1093/nar/19.14.4005 [Print PDF] [Request Permissions]

A. Cheyrou, C. Guyomarc'h, P. Jasserand, and P. Blouin: Improved detection of HBV DNA by PCR after microwave treatment of serum
Nucl. Acids Res. 1991 19: 4006; doi:10.1093/nar/19.14.4006 [Print PDF] [Request Permissions]

Petra Pfeiffer and William G. Thilly: Incomplete kinase labelling of PCR primers yields ‘doublet’ artifacts in denaturing gradient gels
Nucl. Acids Res. 1991 19: 4007; doi:10.1093/nar/19.14.4007 [Print PDF] [Request Permissions]

R.H. Don, P. T. Cox, B.J. Wainwright, K. Baker, and J. S. Mattick: ‘Touchdown’ PCR to circumvent spurious priming during gene amplification
Nucl. Acids Res. 1991 19: 4008; doi:10.1093/nar/19.14.4008 [Print PDF] [Request Permissions]

Laura Spinardi, Raoul Mazars, and Charles Theillet: Protocols for an improved detection of point mutations by SSCP
Nucl. Acids Res. 1991 19: 4009; doi:10.1093/nar/19.14.4009 [Print PDF] [Request Permissions]

I. Raineri, C. Moroni, and H.P. Senn: Improved efficiency for single-sided PCR by creating a reusable pool of first-strand cDNA coupled to a solid phase
Nucl. Acids Res. 1991 19: 4010; doi:10.1093/nar/19.14.4010 [Print PDF] [Request Permissions]

Kevin R. Porter, Stephanie Polo, Gary W. Long, Stephen C. Merritt, and John J. Oprandy: A rapid membrane-based viral RNA isolation method for the polymerase chain reaction
Nucl. Acids Res. 1991 19: 4011; doi:10.1093/nar/19.14.4011 [Print PDF] [Request Permissions]

Stefan Kaluz and Kenneth B.M. Reid: A novel rapid method for detection of PCR products
Nucl. Acids Res. 1991 19: 4012; doi:10.1093/nar/19.14.4012 [Print PDF] [Request Permissions]

Erratum:

Y. Li and M. Sugiura: Nucleic acid-binding specificities of tobacco chioroplast ribonucleoproteins
Nucl. Acids Res. 1991 19: 4044; doi:10.1093/nar/19.14.4044 [Abstract] [Print PDF] [Request Permissions]

Author Index:

: Author Index
Nucl. Acids Res. 1991 19: 4043-4044; doi:10.1093/nar/19.14.4043 [Print PDF] [Request Permissions]

ENZYMOLOGY:

Grigory Dianov and Tomas Lindahl: Preferential recognition of I·T base-pairs in the initiation of excision-repair by hypoxanthine-DNA glycosylase
Nucl. Acids Res. 1991 19: 3829-3833; doi:10.1093/nar/19.14.3829 [Abstract] [Print PDF] [Request Permissions]

Janet E. Yancey and Steven W. Matson: The DNA unwinding reaction catalyzed by Rep protein is facilitated by an RHSP - DNA interaction
Nucl. Acids Res. 1991 19: 3943-3951; doi:10.1093/nar/19.14.3943 [Abstract] [Print PDF] [Request Permissions]

GENOME STRUCTURE AND MAPPING:

Taka-aki Tamura, Kohsuke Sumita, Ichiroh Fujino, Atsuo Aoyama, Masami Horikoshi, Alexander Hoffmann, Robert G. Roeder, Masami Muramatsu, and Katsuhiko Mikoshiba: Striking homology of the ‘Variable’ N-terminal as well as the ‘conserved core’ domains of the mouse and human TATA-factors (TFIID)
Nucl. Acids Res. 1991 19: 3861-3865; doi:10.1093/nar/19.14.3861 [Abstract] [Print PDF] [Request Permissions]

FOR THE RECORD SEQUENCE:

Jeremy C. Mottram, Yasmin Shafi, and J.David Barry: Sequence of a tRNA gene cluster in Trypanosoma brucei
Nucl. Acids Res. 1991 19: 3995; doi:10.1093/nar/19.14.3995 [Print PDF] [Request Permissions]

H.-J. Thiesen, E. Bellefroid, O. Revelant, and J.A. Martial: Conserved KRAB protein domain identified upstream from the zinc finger region of Kox 8
Nucl. Acids Res. 1991 19: 3996; doi:10.1093/nar/19.14.3996 [Print PDF] [Request Permissions]

A. Meisel, D.H. Krüger, and T.A. Bickle: M.EcoPl5 methylates the second adenine in its recognition sequence
Nucl. Acids Res. 1991 19: 3997; doi:10.1093/nar/19.14.3997 [Print PDF] [Request Permissions]

Jorge Laborda: 36B4 cDNA used as an estradiol-independent mRNA control is the cDNA for human acidic ribosomal phosphoprotein PO
Nucl. Acids Res. 1991 19: 3998; doi:10.1093/nar/19.14.3998 [Print PDF] [Request Permissions]

Struan H. Coleman and Donald G. Wild: Location of the fpg gene on the Escherichia coli chromosome
Nucl. Acids Res. 1991 19: 3999; doi:10.1093/nar/19.14.3999 [Print PDF] [Request Permissions]

Pei-Zhi Wang, Steven J. Projan, and Richard P. Novick: Nucleotide sequence of ß-lactamase regulatory genes from staphylococcal plasmid p1258
Nucl. Acids Res. 1991 19: 4000; doi:10.1093/nar/19.14.4000 [Print PDF] [Request Permissions]

Yann Hérault, Denis Michel, Gilles Chatelain, and Gilbert Brun: cDNA and predicted amino acid sequences of the human ribosomal protein genes rpSl2 and rpLl7
Nucl. Acids Res. 1991 19: 4001; doi:10.1093/nar/19.14.4001 [Print PDF] [Request Permissions]

HUMAN DNA MARKERS:

Valérie Lauthier, Denis Mariat, Monique Zoroastro, and Gilles Vergnaud: A synthetic probe, STR 16C2, detects a new polymorphic locus at 5pter (D5S206)
Nucl. Acids Res. 1991 19: 4013; doi:10.1093/nar/19.14.4013 [Print PDF] [Request Permissions]

Valérie Lauthier, Denis Mariat, Monique Zoroastro, and Gilles Vergnaud: A synthetic probe, STR 16018, detects a new polymorphic locus at 12qter (Dl2S55)
Nucl. Acids Res. 1991 19: 4013; doi:10.1093/nar/19.14.4013-a [Print PDF] [Request Permissions]

Valérie Lauthier, Denis Mariat, Monique Zoroastro, and Gilles Vergnaud: A synthetic probe, STR 16C17, detects a new polymorphic locus at l7pter (D17S450)
Nucl. Acids Res. 1991 19: 4014; doi:10.1093/nar/19.14.4014 [Print PDF] [Request Permissions]

Valérie Lauthier, Denis Mariat, Monique Zoroastro, and Gilles Vergnaud: A synthetic probe, STR 14C13, detects a new polymorphic locus on chromosome arm 7q (D7S450)
Nucl. Acids Res. 1991 19: 4014; doi:10.1093/nar/19.14.4014-a [Print PDF] [Request Permissions]

Valérie Lauthier, Denis Mariat, Monique Zoroastro, and Gilles Vergnaud: A synthetic probe, STR 14C19, detects a new polymorphic locus at 16pter (D16S282)
Nucl. Acids Res. 1991 19: 4015; doi:10.1093/nar/19.14.4015 [Print PDF] [Request Permissions]

Bernice A. Allitto, Glenn T. Horn, Michael R. Altherr, Brenda Richards, Andrea I. McClatchey, John J. Wasmuth, and James F. Gusella: Detection by PCR of the VNTR polymorphism at D4S95
Nucl. Acids Res. 1991 19: 4015; doi:10.1093/nar/19.14.4015-a [Print PDF] [Request Permissions]

Andrew A. Hicks, Keith J. Johnson, Eric A. Barnard, and Mark G. Darlison: Dinucleotide repeat polymorphism in the human X-linked GABA_A receptor a³-subunit gene
Nucl. Acids Res. 1991 19: 4016; doi:10.1093/nar/19.14.4016 [Print PDF] [Request Permissions]

Joy Wu and John M. Nickerson: PCR detection of the Mspl polymorphism in the human IRBP gene (RPB3)
Nucl. Acids Res. 1991 19: 4016; doi:10.1093/nar/19.14.4016-a [Print PDF] [Request Permissions]

P. Patel, Y.M.D. Lo, G.I. Bell, R.C. Turner, and J.S. Wainscoat: Dinucleotide repeat polymorphism at the human GLUT2 locus
Nucl. Acids Res. 1991 19: 4017; doi:10.1093/nar/19.14.4017 [Print PDF] [Request Permissions]

L. Strain, D.T. Bonthron, and D.J.H. Brock: Smal and Hhal polymorphisms in the 5' region of the human von Willebrand factor gene (F8VWF)
Nucl. Acids Res. 1991 19: 4017; doi:10.1093/nar/19.14.4017-a [Print PDF] [Request Permissions]

Mihael H. Polymeropoulos, Denise S. Rath, Hong Xiao, and Carl R. Merril: Tetranucleotide repeat polymorphism at the human c-fes/fps proto-oncogene (FES)
Nucl. Acids Res. 1991 19: 4018; doi:10.1093/nar/19.14.4018 [Print PDF] [Request Permissions]

Mihael H. Polymeropoulos, Hong Xiao, Denise S. Rath, and Carl R. Merril: Dinucleotide repeat polymorphism at the human CTLA4 gene
Nucl. Acids Res. 1991 19: 4018; doi:10.1093/nar/19.14.4018-a [Print PDF] [Request Permissions]

Mihael H. Polymeropoulos, Hong Xiao, Denise S. Rath, and Carl R. Merril: Dinucleotide repeat polymorphism at the human cardiac beta-myosin gene
Nucl. Acids Res. 1991 19: 4019; doi:10.1093/nar/19.14.4019 [Print PDF] [Request Permissions]

Mihael H. Polymeropoulos, Denise S. Rath, Hong Xiao, and Carl R. Merril: Dinucleotide repeat polymorphism at the human ATP synthase beta subunit gene (ATPSB)
Nucl. Acids Res. 1991 19: 4019; doi:10.1093/nar/19.14.4019-a [Print PDF] [Request Permissions]

Margit Burmeister, David R. Cox, and Richard M. Myers: Taql RFLP at D21S137
Nucl. Acids Res. 1991 19: 4020; doi:10.1093/nar/19.14.4020 [Print PDF] [Request Permissions]

A.D. Auerbach, R.G. Allen, and W.R. Mann: A Taql RFLP at the human TOP1 pseudogene locus on chromosome 22q11.2-13.1 (TOP1P2)
Nucl. Acids Res. 1991 19: 4020; doi:10.1093/nar/19.14.4020-a [Print PDF] [Request Permissions]

V. Royal, M.J. Alberts, M.A. Pericak-Vance, G. Finocchiaro, J. Bebout, L. Yamaoka, W.-Y. Hung, P.C. Gaskell, and A.D. Roses: Rsal RFLP for electron transport flavoprotein-beta(ETFB)
Nucl. Acids Res. 1991 19: 4021; doi:10.1093/nar/19.14.4021 [Print PDF] [Request Permissions]

G. Rose, C. Giacchetto, and G. De Benedictis: Acyl-RFLP identified on an amplified region of the TPO gene
Nucl. Acids Res. 1991 19: 4021; doi:10.1093/nar/19.14.4021-a [Print PDF] [Request Permissions]

Eric S. Brewster, Miles B. Brennan, and Henrik vissing: Dinucleotide repeat polymorphism in the lL-2Rß gene
Nucl. Acids Res. 1991 19: 4022; doi:10.1093/nar/19.14.4022 [Print PDF] [Request Permissions]

Anders Wallmark, Virgil L. Rose, Coty Ho, and Katherine A. High: A NlalV polymorphism within the human Factor X gene
Nucl. Acids Res. 1991 19: 4022; doi:10.1093/nar/19.14.4022-a [Print PDF] [Request Permissions]

V. Sharma, D. Patterson, and M. Litt: Dinucleotide repeat polymorphism at the D21S198 locus
Nucl. Acids Res. 1991 19: 4023; doi:10.1093/nar/19.14.4023 [Print PDF] [Request Permissions]

V. Sharma, D. Brown, L. Smith, R.E. Magenis, and M. Litt: Dinucleotide repeat polymorphism at the D9S55 locus
Nucl. Acids Res. 1991 19: 4023; doi:10.1093/nar/19.14.4023-a [Print PDF] [Request Permissions]

NUCLEOTIDE SEQUENCE UPDATE:

: New nucleotide sequence data on the EMBL File Server
Nucl. Acids Res. 1991 19: 4025-4042; doi:10.1093/nar/19.14.4025 [Print PDF] [Request Permissions]

Nucleic Acids Research